FlowSorted.CordBloodNorway.450k
This is the released version of FlowSorted.CordBloodNorway.450k; for the devel version, see FlowSorted.CordBloodNorway.450k.
Illumina HumanMethylation data on sorted cord blood cell populations
Bioconductor version: Release (3.23)
Raw data objects for the Illumina 450k DNA methylation microarrays, for cell type composition estimation.
Author: kristina gervin [cre, aut], Kasper Daniel Hansen [aut]
Maintainer: kristina gervin <kristina.gervin at medisin.uio.no>
citation("FlowSorted.CordBloodNorway.450k")):
Huber W, Carey VJ, Gentleman R, Anders S, Carlson M, Carvalho BS, Bravo HC, Davis S, Gatto L, Girke T, Gottardo R, Hahne F, Hansen KD, Irizarry RA, Lawrence M, Love MI, MacDonald J, Obenchain V, Oleś AK, Pagès H, Reyes A, Shannon P, Smyth GK, Tenenbaum D, Waldron L, Morgan M (2015). "Orchestrating high-throughput genomic analysis with Bioconductor." Nature Methods, 12(2), 115–121. doi:10.1038/nmeth.3252.
Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge Y, Gentry J, Hornik K, Hothorn T, Huber W, Iacus S, Irizarry R, Leisch F, Li C, Maechler M, Rossini AJ, Sawitzki G, Smith C, Smyth G, Tierney L, Yang JYH, Zhang J (2004). "Bioconductor: open software development for computational biology and bioinformatics." Genome Biology, 5(10), R80. doi:10.1186/gb-2004-5-10-r80.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("FlowSorted.CordBloodNorway.450k")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | ExperimentData, Homo_sapiens_Data, MethylationArrayData, MicroarrayData, Tissue, TissueMicroarrayData |
| Version | 1.38.0 |
| License | Artistic-2.0 |
| Depends | R (>= 3.5.0), minfi(>= 1.21.2) |
| Imports | |
| System Requirements | |
| URL | https://bitbucket.com/kasperdanielhansen/Illumina_CordBlood |
See More
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| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | FlowSorted.CordBloodNorway.450k_1.38.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (big-sur-x86_64) | |
| macOS Binary (sonoma-arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/FlowSorted.CordBloodNorway.450k |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/FlowSorted.CordBloodNorway.450k |
| Package Short Url | https://bioconductor.org/packages/FlowSorted.CordBloodNorway.450k/ |
| Package Downloads Report | Download Stats |