--- 
title: "Introduction to Single-Cell Analysis with Bioconductor"
documentclass: book
bibliography: ref.bib
biblio-style: apalike
link-citations: yes
favicon: "`r rebook::BiocFavicon()`"
github-repo: "OSCA-source/OSCA.intro"
---

```{r, echo=FALSE}
.gh_url <- file.path('https://github.com', rmarkdown::metadata[['github-repo']])
```

---
date: "`r rebook::openingDetails(Source=.gh_url)`"
url: "`r .gh_url`"
---

# Welcome {-}

<a href="https://bioconductor.org"><img src="`r rebook::BiocSticker('animated')`" width="200" alt="Bioconductor Sticker" align="right" style="margin: 0 1em 0 1em" /></a> 

This site contains the introductory chapters for the `r BiocStyle::Biocbook("OSCA", label='__"Orchestrating Single-Cell Analysis with Bioconductor"__ book')`.
```{r, results="asis", echo=FALSE}
text <- packageDescription("OSCA.intro")$Description
remainders <- strsplit(text, "\\.\\s")[[1]][-1]
remainders <- gsub("SingleCellExperiment", "`SingleCellExperiment`", remainders)
remainders <- gsub("Bioconductor", "[Bioconductor](https://bioconductor.org)", remainders)
remainders <- paste(remainders, collapse=". ")
cat(remainders)
```
