b99dbf02e7cf265996a687245465357d *DESCRIPTION
60591687d87dedd2eef51c5c24d57368 *LICENSE
bb83a263b3bd2ddd3ae32ee9415d7b07 *NAMESPACE
516d47a5df2ffaf85adb1f4d0d3368d5 *NEWS.md
b4fe12876c37f8a22cde06e9701eecf0 *R/CRISPRball-package.R
d4d55bcb6450e8f40a69ab8be17433f1 *R/CRISPRball.R
94251e234dc7c68e4cf51c820d5f35c0 *R/UI_QC.R
be4db8fa67947a9950e34daffa6f70e6 *R/UI_about.R
073a812497014408b34f6003ac20224f *R/UI_comparison.R
1f8eef58c63f911784f8a55b6b29957c *R/UI_data_upload.R
b4a12a25cf33bd5ae895b953b4711a84 *R/UI_depmap.R
0a0c6c31be391144bfa2625368df356d *R/UI_gene.R
a0975ab91b5c6c58f9398a4f4d49e1f2 *R/UI_sgrna.R
58df4a628c79c6580b3de61451e42c86 *R/UI_styling.R
7b164cee6c930f198d7fc17e1036a360 *R/data.R
0b59288ff12fff6d90d219e3bad22767 *R/observers_UI.R
48967032c8c70a3fb5d226b0e530ac02 *R/observers_comparisons.R
14f790b64c82d1bbca9596ecca7e236a *R/observers_data_upload.R
b116183d99f5b9d77d992d7967f98051 *R/observers_gene.R
03ccd349bb877090fec7aae1606d3364 *R/observers_qc.R
b69ef0347a089bf3dc151fc5898d0d03 *R/observers_sgrna.R
c480b707eb43d521e9d17f2667ae4d2d *R/outputs_comparisons.R
81b40d42ae80200b4a5843ee5a620ef8 *R/outputs_depmap.R
2a2947a493529651a5ba4d8157f5e214 *R/outputs_dl_handlers.R
bc3d24e0e64e5f4e47370018b67335ff *R/outputs_gene.R
ee635451686727a1f196ef28d304328b *R/outputs_qc.R
9359f4aaad118223131f668b50e2c553 *R/outputs_sgrna.R
c00e74c4fe7140c5faa58666e7bb52d2 *R/plotting_depmap.R
2a160ae145ce31e324424a47c0d94ca8 *R/plotting_gene_sgrna.R
06fd002dcdf9cc27e7a2b84efa01970d *R/plotting_qc.R
678dcd3b7e28fb7180b5fea208ddf1f7 *R/plotting_utils.R
d9729e858e5125c4103a3a8261ea6c32 *R/utils_data_upload.R
c5aad772bd13e23a2948aff256ac4520 *R/utils_depmap.R
b6e445c0ec342f7819d448e0b56db1ca *R/zzz.R
f7dc472a5d863c4f55b764cec8aaffe9 *README.md
4b7b5e2e21b687dba24b6713162d2740 *build/vignette.rds
8af6f105009bbb004d9a1d37b319aa79 *data/depmap_22q1_TPM.rda
3aba4993ab06973cb2a662970d312827 *data/depmap_22q1_cn.rda
b69187c51b7dfd018b983ff1678dcdd6 *data/depmap_22q1_crispr.rda
bd030f6b2c8b6c84ee017bdc11f7214c *data/depmap_22q1_crispr_rnai.rda
11aea1998d3a7c197996bcd6818d10cb *data/depmap_22q1_rnai.rda
27c44ec7b3e3580dd7e5f9423d11ca82 *inst/doc/CRISPRball.R
2bb3219dd0d88efb4cbf8d9ab90bf25f *inst/doc/CRISPRball.Rmd
9c55a52b0f24af9cd2958fcd3b4f6b6f *inst/doc/CRISPRball.html
f305ee9f3703e57ff91ae7f9d40e2224 *inst/extdata/beta_leukemia.gene_summary.txt
6f7e3921181c7643f93068e3a07d2ee2 *inst/extdata/beta_leukemia.sgrna_summary.txt
f7c5537e11666816e0577c02decf9b56 *inst/extdata/esc1.gene_summary.txt
cc2860d71a74305488e623a0d0d58380 *inst/extdata/esc1.sgrna_summary.txt
96ef6c402f318f3f5c5d976e45aebc98 *inst/extdata/escneg.count_normalized.txt
0e8c210ce2ad1988c67ba86f3798d7a0 *inst/extdata/escneg.countsummary.txt
8b9547ab218ee579f016ca69e567c408 *inst/extdata/leukemia.new_1000.csv
3975b73a3a7cf0350ec5ea1aff5e3b32 *inst/extdata/plasmid.gene_summary.txt
4ee337d6ceee55cf35e3b6e3e0949c72 *inst/extdata/plasmid.sgrna_summary.txt
ee53e1cddf0db0b94b05bac45a3db783 *inst/logo/CRISPRball_Hex.png
7b7b57876fc5f3414c25038b8398f540 *inst/script/mageck_mle.sh
bfdef09f750e484d3afd39b7ab4091ac *inst/script/mageck_rra.sh
ebc20d839195fff86d160f42e6f5a2e7 *longtests/testthat.R
62d5e28ce091cf903a89ff139a35e568 *longtests/testthat/test-build_depmap_db.R
424a5d2c0d3793ef70574ea921f92570 *man/CRISPRball-package.Rd
f0b43e5a9902ce9e67f4f57151647f69 *man/CRISPRball.Rd
cb6566771748cdc0e0b3efa042e88ebf *man/build_depmap_db.Rd
524a667a88dc6eafd5307de9b6c7af70 *man/depmap_22q1_TPM.Rd
7ad4fd8f95152d91cb11cbdd96d0dede *man/depmap_22q1_cn.Rd
4789337fb18a0f146643026ee7922298 *man/depmap_22q1_crispr.Rd
b315eea913f48166f0780a0cfb598c6b *man/depmap_22q1_crispr_rnai.Rd
039c2744c51071248cb6534f7ea4cba6 *man/depmap_22q1_rnai.Rd
e3b544b51644a85ee7c1d63a30e97e1e *man/gene_ingress.Rd
2252ca273433b4d66d5a565aea8e5d62 *man/get_depmap_essentiality.Rd
5d98c6637c8475753de1c8d9a61ec801 *man/get_depmap_plot_data.Rd
76b830b3fa905a5cc24b543c3cfda919 *man/plot_bar.Rd
29fb339437fb5e5477a706db7000c334 *man/plot_correlation_heatmap.Rd
e17bf68295e7ae3e6a7f671ea4ad2169 *man/plot_depmap_cn.Rd
5c2ecbb6e2733bb3be4f66ac5e253fba *man/plot_depmap_dependency.Rd
d6b5193f613dd08218e0d373f14d7996 *man/plot_depmap_expression.Rd
114afc9bc6f00ac97a282a9f2b500810 *man/plot_depmap_lineages.Rd
a1a9e7a5de7ba2a5c956204081bc999c *man/plot_hist.Rd
851a1382b97e7b72baf2d43c34b66208 *man/plot_lawn.Rd
38b0cf13351f62ceb74f7d5d91872720 *man/plot_pca_biplot.Rd
bd5cca495ab2673f953ad0a85e4bcd91 *man/plot_rank.Rd
8652ab17e9f5206744ebc27e56dfbf17 *man/plot_volcano.Rd
f6a2b25287ad86a62656cf6363852dc1 *man/read_mle_gene_summary.Rd
c420e059e4e7a8f1826af473752fdc68 *tests/testthat.R
d9f1390880e902e18ddd1a91f3219c90 *tests/testthat/setup-data.R
3b7163b90fd05a6955d0be31c7f881b4 *tests/testthat/test-plotting_depmap.R
8c8d358443b4c973de46625e496052cd *tests/testthat/test-plotting_gene_sgrna.R
e15f43dbdc6a423486dd2df810dc8bad *tests/testthat/test-plotting_qc.R
105e2027bb833362c14fddb0ccd540c9 *tests/testthat/test-utils_depmap.R
2bb3219dd0d88efb4cbf8d9ab90bf25f *vignettes/CRISPRball.Rmd
cb7a0e34618eaeff124fc6da3c14e54a *vignettes/depmap_cb.png
fd9ac1a3467b761b32a107165f5d9922 *vignettes/gene_cb.png
b62bc5ad73c66ed40867d97032e313f0 *vignettes/rra_qc_cb.png
d40f22a3b9e1313b1239bae609a0c6ff *vignettes/upload_cb.png
