# Clustering algorithm for ddPCR data

## Documentation for package ‘ddPCRclust’ version 1.31.0

- DESCRIPTION file
- Package NEWS
- Package README

## Help Pages

ddPCRclust-package | ddPCRclust A package for automated quantification of multiplexed ddPCR data
calculateCPDs | Calculates the copies per droplet
createEnsemble | Create a cluster ensemble
ddPCRclust | ddPCRclust A package for automated quantification of multiplexed ddPCR data
exportPlots | Plot the algorithms results with ggplot2
exportToCSV | Export the algorithms results to a csv file
exportToExcel | Export the algorithms results to an Excel file
readFiles | Read the csv files from your disk
readTemplate | Read a template file from disk
runDensity | Find the clusters using flowDensity
runPeaks | Find the clusters using flowPeaks
runSam | Find the clusters using SamSPECTRAL
shearCorrection | Correct for DNA shearing