# In-Silico Annotation of Doublets for Single Cell RNA Sequencing Data

## Documentation for package ‘scds’ version 1.99.0

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

bcds | Find doublets/multiplets in UMI scRNA-seq data;
cxds | Find doublets/multiplets in UMI scRNA-seq data;
cxds_bcds_hybrid | Find doublets/multiples in UMI scRNA-seq data;
cxds_getTopPairs | Extract top-scoring gene pairs from an SingleCellExperiment where cxds has been run
get_dblCalls_ALL | Wrapper for getting doublet calls
get_dblCalls_dist | Derive doublet calls from doublset scores
get_dblCalls_ROC | Derive doublet calls from classification probabilities
sce_chcl | Example single cell experiment ('SingleCellExperiment') object