# MetaboCoreUtils 1.20

## Changes in 1.20.1

- Add `adductCharge()` and `standardizeSingleCharge()` functions.

# MetaboCoreUtils 1.19

## Changes in 1.19.3

- Add functionality to translate between naming schemes used by different
  software.

## Changes in 1.19.2

- Add `beta_values()` function for chromatographic peak quality assessment.

## Changes in 1.19.1

- Update unit tests to replace deprecated functions.

# MetaboCoreUtils 1.17

## Changes in 1.17.1

- Fix adductFormula() for negative adducts. and added respective unit test.

# MetaboCoreUtils 1.13

## Changes in 1.13.1

- Complete unit tests.

# MetaboCoreUtils 1.11

## MetaboCoreUtils 1.11.3

- Add examples on isotopes (including deuterium) can be used with
  `calculateMass` (issue
  [#81](https://github.com/rformassspectrometry/MetaboCoreUtils/issues/81))

## MetaboCoreUtils 1.11.2

- Add functions to compute quality check of the data (issue
  [#77]((https://github.com/rformassspectrometry/MetaboCoreUtils/issues/77))

## MetaboCoreUtils 1.11.1

- Add functions to enable linear model-based adjustment of (LC-MS derived)
  abundance matrices (issue
  [#75](https://github.com/rformassspectrometry/MetaboCoreUtils/issues/75)).

# MetaboCoreUtils 1.9

## MetaboCoreUtils 1.9.4

- Add function `mclosest` (issue
  [#20](https://github.com/rformassspectrometry/MetaboCoreUtils/issues/20)).

## MetaboCoreUtils 1.9.3

- `isotopologues` checks if provided m/z values are increasingly ordered.

## MetaboCoreUtils 1.9.2

- `countElements` returns `NA` for invalid elements instead of silently
  dropping them (
  PR [#65](https://github.com/rformassspectrometry/MetaboCoreUtils/pull/65)).

## MetaboCoreUtils 1.9.1

- `countElements`, `subtractElements` and `addElements` returns `NA` if
  an input arguments is `NA`
  (issue [#61](https://github.com/rformassspectrometry/MetaboCoreUtils/issues/61),
  PR [#62](https://github.com/rformassspectrometry/MetaboCoreUtils/pull/62)).

# MetaboCoreUtils 1.5

## MetaboCoreUtils 1.5.2

- `substractElements` drops elements with zero counts (issue
  [#57](https://github.com/rformassspectrometry/MetaboCoreUtils/issues/55)).

## MetaboCoreUtils 1.5.1

- Add functions `formula2mz`, `adductFormula` and `multiplyElements` (issue
  [#55](https://github.com/rformassspectrometry/MetaboCoreUtils/issues/55)).

# MetaboCoreutils 1.3

## MetaboCoreUtils 1.3.8

- Support for heavy isotopes in `countElements`/`pasteElements`/`calculateMass`
  (issue [#53](https://github.com/rformassspectrometry/MetaboCoreUtils/issues/53)).

## MetaboCoreUtils 1.3.7

- Fix bug in `containsElements` function (issue
  [#51](https://github.com/rformassspectrometry/MetaboCoreUtils/issues/51)).

## MetaboCoreUtils 1.3.6

- Add functions for Kendrick mass defects.

## MetaboCoreUtils 1.3.5

- Add missing unit tests.

## MetaboCoreUtils 1.3.4

- Add `calculateMass` function.

## MetaboCoreUtils 1.3.3

- Vectorized versions for chemical mass functions.

## MetaboCoreUtils 1.3.2

- Function for conversion of migration time to effective mobility in CE-MS.

## MetaboCoreUtils 1.3.1

- Add isotope detection functionality.

# MetaboCoreutils 1.1

## MetaboCoreUtils 1.1.3

- Add isotope detection functionality.

## MetaboCoreUtils 1.1.2

- Add already charged adduct/ion to the adduct definition.

## MetaboCoreUtils 1.1.1

- Add `correctRindex` function.
- Add `isotopologue` function to group isotopologues in MS spectra.

# MetaboCoreutils 0.99

## MetaboCoreUtils 0.99.1

- Add `[M+H-2(H2O)]+` adduct definition.

## MetaboCoreUtils 0.99.0

- Add package vignette and prepare for Bioconductor submission.

# MetaboCoreutils 0.0

## MetaboCoreUtils 0.0.3

- Add `internalStandards` and `internalStandardsNames` functions.

## MetaboCoreUtils 0.0.3

- Refactor `mass2mz` and `mz2mass` to support calculation of multiple adducts
  for multiple input values as well as user defined adduct definition.
- Add functions `adducts` to return a `data.frame` with the (built-in) adduct
  definitions.

## MetaboCoreUtils 0.0.2

- Vectorize `mass2mz` and `mz2mass` and additional performance improvement.

## MetaboCoreUtils 0.0.1

- Add utility functions to work with chemical formulas: `pasteElements`,
  `countElements` and `standardizeFormula`.
- Add utility functions to convert between m/z and monoisotopic masses based on
  provided ion adduct information.
