# Identification of gene fusions using paired-end sequencing

## Documentation for package ‘DNAfusion’ version 1.13.0

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

ALK_sequence | Identification of ALK breakpoint bases
break_position | EML4-ALK breakpoint
break_position_depth | Read depth at breakpoint
EML4_ALK_analysis | Complete EML4-ALK analysis
EML4_ALK_detection | Detection of ALK and EML4 breakpoint
EML4_sequence | Identification of EML4 breakpoint bases
find_variants | Detect the variants of ALK-EML4
introns_ALK_EML4 | Detect ALK and EML4 introns of the breakpoint