"Title","Description","BiocVersion","Genome","SourceType","SourceUrl","SourceVersion","Species","TaxonomyId","Coordinate_1_based","DataProvider","Maintainer","RDataClass","DispatchClass","RDataPath","Tags","Notes"
"crispr_21Q2","(CERES) Batch and off-target corrected CRISPR-Cas9 gene, knockdout dependency data for 17645 genes, 990 cell lines, 32 primary diseases and 30 lineages.","3.13","","CSV","https://ndownloader.figshare.com/files/27902226","May 27 2021","Homo sapiens",9606,TRUE,"Broad Institute","Theo Killian <theo.killian@kuleuven.be>","tibble","Rda","depmap/crispr_21Q2.rda","ExperimentHub, ExperimentData, ReproducibleResearch, RepositoryData, AssayDomainData, CopyNumberVariationData, DiseaseModel, CancerData, BreastCancerData, ColonCancerData, KidneyCancerData, LeukemiaCancerData, LungCancerData, OvarianCancerData, ProstateCancerData OrganismData, Homo_sapiens_Data, PackageTypeData, SpecimenSource, CellCulture, Genome, Proteome, StemCell, Tissue","This dataset is from the 21Q2 release"
"copyNumber_21Q2","WES log copy number data for 27562 genes, 1742 cell lines, 35 primary diseases and 38 lineages.","3.13","","CSV","https://ndownloader.figshare.com/files/27902124","May 27 2021","Homo sapiens",9606,TRUE,"Broad Institute","Theo Killian <theo.killian@kuleuven.be>","tibble","Rda","depmap/copyNumber_21Q2.rda","ExperimentHub, ExperimentData, ReproducibleResearch, RepositoryData, AssayDomainData, CopyNumberVariationData, DiseaseModel, CancerData, BreastCancerData, ColonCancerData, KidneyCancerData, LeukemiaCancerData, LungCancerData, OvarianCancerData, ProstateCancerData OrganismData, Homo_sapiens_Data, PackageTypeData, SpecimenSource, CellCulture, Genome, Proteome, StemCell, Tissue","This dataset is from the 21Q2 release"
"TPM_21Q2","CCLE 'Transcript Per Million' (TPM) RNAseq gene expression data (in scale scale (log2(TPM+1))) for protein coding genes from 19177 genes, 1379 cancer cell lines, 33 primary diseases and 37 lineages.","3.13","","CSV","https://ndownloader.figshare.com/files/27902091","May 27 2021","Homo sapiens",9606,TRUE,"Broad Institute","Theo Killian <theo.killian@kuleuven.be>","tibble","Rda","depmap/TPM_21Q2.rda","ExperimentHub, ExperimentData, ReproducibleResearch, RepositoryData, AssayDomainData, CopyNumberVariationData, DiseaseModel, CancerData, BreastCancerData, ColonCancerData, KidneyCancerData, LeukemiaCancerData, LungCancerData, OvarianCancerData, ProstateCancerData OrganismData, Homo_sapiens_Data, PackageTypeData, SpecimenSource, CellCulture, Genome, Proteome, StemCell, Tissue","This dataset is from the 21Q2 release"
"mutationCalls_21Q2","CCLE mutation calls (for coding region, germline filtered) and includes data from 18787 genes, 1750 cell lines, 35 primary diseases and 38 lineages.","3.13","","CSV","https://ndownloader.figshare.com/files/27902118","May 27 2021","Homo sapiens",9606,TRUE,"Broad Institute","Theo Killian <theo.killian@kuleuven.be>","tibble","Rda","depmap/mutationCalls_21Q2.rda","ExperimentHub, ExperimentData, ReproducibleResearch, RepositoryData, AssayDomainData, CopyNumberVariationData, DiseaseModel, CancerData, BreastCancerData, ColonCancerData, KidneyCancerData, LeukemiaCancerData, LungCancerData, OvarianCancerData, ProstateCancerData OrganismData, Homo_sapiens_Data, PackageTypeData, SpecimenSource, CellCulture, Genome, Proteome, StemCell, Tissue","This dataset is from the 21Q2 release"
"metadata_21Q2","Metadata for cell lines in the 21Q2 DepMap release, for 0 genes, 1814 cell lines, 35 primary diseases and 39 lineages.","3.13","","CSV","https://ndownloader.figshare.com/files/27902376","May 27 2021","Homo sapiens",9606,TRUE,"Broad Institute","Theo Killian <theo.killian@kuleuven.be>","tibble","Rda","depmap/metadata_21Q2.rda","ExperimentHub, ExperimentData, ReproducibleResearch, RepositoryData, AssayDomainData, CopyNumberVariationData, DiseaseModel, CancerData, BreastCancerData, ColonCancerData, KidneyCancerData, LeukemiaCancerData, LungCancerData, OvarianCancerData, ProstateCancerData OrganismData, Homo_sapiens_Data, PackageTypeData, SpecimenSource, CellCulture, Genome, Proteome, StemCell, Tissue","This dataset is from the 21Q2 release"
