"Title","Description","BiocVersion","Genome","SourceType","SourceUrl","SourceVersion","Species","TaxonomyId","Coordinate_1_based","DataProvider","Maintainer","RDataClass","DispatchClass","RDataPath","Tags","Notes"
"crispr_21Q4","(CERES) Batch and off-target corrected CRISPR-Cas9 gene, knockdout dependency data for 17386 genes, 1054 cell lines, 32 primary diseases and 30 lineages.","3.14","","CSV","https://ndownloader.figshare.com/files/31315996","Nov 10 2021","Homo sapiens",9606,TRUE,"Broad Institute","Theo Killian <theo.killian@kuleuven.be>","tibble","Rda","depmap/crispr_21Q4.rda","ExperimentHub, ExperimentData, ReproducibleResearch, RepositoryData, AssayDomainData, CopyNumberVariationData, DiseaseModel, CancerData, BreastCancerData, ColonCancerData, KidneyCancerData, LeukemiaCancerData, LungCancerData, OvarianCancerData, ProstateCancerData OrganismData, Homo_sapiens_Data, PackageTypeData, SpecimenSource, CellCulture, Genome, Proteome, StemCell, Tissue","This dataset is from the 21Q4 release"
"copyNumber_21Q4","WES log copy number data for 27368 genes, 1750 cell lines, 35 primary diseases and 37 lineages.","3.14","","CSV","https://ndownloader.figshare.com/files/31315924","Nov 10 2021","Homo sapiens",9606,TRUE,"Broad Institute","Theo Killian <theo.killian@kuleuven.be>","tibble","Rda","depmap/copyNumber_21Q4.rda","ExperimentHub, ExperimentData, ReproducibleResearch, RepositoryData, AssayDomainData, CopyNumberVariationData, DiseaseModel, CancerData, BreastCancerData, ColonCancerData, KidneyCancerData, LeukemiaCancerData, LungCancerData, OvarianCancerData, ProstateCancerData OrganismData, Homo_sapiens_Data, PackageTypeData, SpecimenSource, CellCulture, Genome, Proteome, StemCell, Tissue","This dataset is from the 21Q4 release"
"TPM_21Q4","CCLE 'Transcript Per Million' (TPM) RNAseq gene expression data (in scale scale (log2(TPM+1))) for protein coding genes from 19177 genes, 1389 cell lines, 33 primary diseases and 37 lineages.","3.14","","CSV","https://ndownloader.figshare.com/files/31315882","Nov 10 2021","Homo sapiens",9606,TRUE,"Broad Institute","Theo Killian <theo.killian@kuleuven.be>","tibble","Rda","depmap/TPM_21Q4.rda","ExperimentHub, ExperimentData, ReproducibleResearch, RepositoryData, AssayDomainData, CopyNumberVariationData, DiseaseModel, CancerData, BreastCancerData, ColonCancerData, KidneyCancerData, LeukemiaCancerData, LungCancerData, OvarianCancerData, ProstateCancerData OrganismData, Homo_sapiens_Data, PackageTypeData, SpecimenSource, CellCulture, Genome, Proteome, StemCell, Tissue","This dataset is from the 21Q4 release"
"mutationCalls_21Q4","CCLE mutation calls (for coding region, germline filtered) and includes data from 18784 genes, 1755 cell lines, 35 primary diseases and 37 lineages.","3.14","","CSV","https://ndownloader.figshare.com/files/31315930","Nov 10 2021","Homo sapiens",9606,TRUE,"Broad Institute","Theo Killian <theo.killian@kuleuven.be>","tibble","Rda","depmap/mutationCalls_21Q4.rda","ExperimentHub, ExperimentData, ReproducibleResearch, RepositoryData, AssayDomainData, CopyNumberVariationData, DiseaseModel, CancerData, BreastCancerData, ColonCancerData, KidneyCancerData, LeukemiaCancerData, LungCancerData, OvarianCancerData, ProstateCancerData OrganismData, Homo_sapiens_Data, PackageTypeData, SpecimenSource, CellCulture, Genome, Proteome, StemCell, Tissue","This dataset is from the 21Q4 release"
"metadata_21Q4","Metadata for cell lines in the 21Q4 DepMap release, for 0 genes, 1825 cell lines, 35 primary diseases and 39 lineages.","3.14","","CSV","https://ndownloader.figshare.com/files/31316011","Nov 10 2021","Homo sapiens",9606,TRUE,"Broad Institute","Theo Killian <theo.killian@kuleuven.be>","tibble","Rda","depmap/metadata_21Q4.rda","ExperimentHub, ExperimentData, ReproducibleResearch, RepositoryData, AssayDomainData, CopyNumberVariationData, DiseaseModel, CancerData, BreastCancerData, ColonCancerData, KidneyCancerData, LeukemiaCancerData, LungCancerData, OvarianCancerData, ProstateCancerData OrganismData, Homo_sapiens_Data, PackageTypeData, SpecimenSource, CellCulture, Genome, Proteome, StemCell, Tissue","This dataset is from the 21Q4 release"
