"Title","Description","BiocVersion","Genome","SourceType","SourceUrl","SourceVersion","Species","TaxonomyId","Coordinate_1_based","DataProvider","Maintainer","RDataClass","DispatchClass","RDataPath","Tags","Notes"
"crispr_20Q4","(CERES) Batch and off-target corrected CRISPR-Cas9 gene, knockdout dependency data for 18119 genes, 808 cell lines, 31 primary diseases and 29 lineages.","3.12","","CSV","https://ndownloader.figshare.com/files/25494359","Nov 20 2020","Homo sapiens",9606,TRUE,"Broad Institute","Theo Killian <theodore.killian@kuleuven.vib.be>","tibble","Rda","depmap/crispr_20Q4.rda","ExperimentHub, ExperimentData, ReproducibleResearch, RepositoryData, AssayDomainData, CopyNumberVariationData, DiseaseModel, CancerData, BreastCancerData, ColonCancerData, KidneyCancerData, LeukemiaCancerData, LungCancerData, OvarianCancerData, ProstateCancerDataOrganismData, Homo_sapiens_Data, PackageTypeData, SpecimenSource, CellCulture, Genome, Proteome, StemCell, Tissue","This dataset is from the 20Q4 release"
"copyNumber_20Q4","WES log copy number data for 27562 genes, 1753 cell lines, 35 primary diseases and 38 lineages.","3.12","","CSV","https://ndownloader.figshare.com/files/25494416","Nov 20 2020","Homo sapiens",9606,TRUE,"Broad Institute","Theo Killian <theodore.killian@kuleuven.vib.be>","tibble","Rda","depmap/copyNumber_20Q4.rda","ExperimentHub, ExperimentData, ReproducibleResearch, RepositoryData, AssayDomainData, CopyNumberVariationData, DiseaseModel, CancerData, BreastCancerData, ColonCancerData, KidneyCancerData, LeukemiaCancerData, LungCancerData, OvarianCancerData, ProstateCancerDataOrganismData, Homo_sapiens_Data, PackageTypeData, SpecimenSource, CellCulture, Genome, Proteome, StemCell, Tissue","This dataset is from the 20Q4 release"
"TPM_20Q4","CCLE 'Transcript Per Million' (TPM) RNAseq gene expression data (in scale scale (log2(TPM+1))) for protein coding genes from 19182 genes, 1376 cancer cell lines, 33 primary diseases and 37 lineages.","3.12","","CSV","https://ndownloader.figshare.com/files/25494389","Nov 20 2020","Homo sapiens",9606,TRUE,"Broad Institute","Theo Killian <theodore.killian@kuleuven.vib.be>","tibble","Rda","depmap/TPM_20Q4.rda","ExperimentHub, ExperimentData, ReproducibleResearch, RepositoryData, AssayDomainData, CopyNumberVariationData, DiseaseModel, CancerData, BreastCancerData, ColonCancerData, KidneyCancerData, LeukemiaCancerData, LungCancerData, OvarianCancerData, ProstateCancerDataOrganismData, Homo_sapiens_Data, PackageTypeData, SpecimenSource, CellCulture, Genome, Proteome, StemCell, Tissue","This dataset is from the 20Q4 release"
"mutationCalls_20Q4","CCLE mutation calls (for coding region, germline filtered) and includes data from 18789 genes, 1749 cell lines, 35 primary diseases and 38 lineages. ","3.12","","CSV","https://ndownloader.figshare.com/files/25494419","Nov 20 2020","Homo sapiens",9606,TRUE,"Broad Institute","Theo Killian <theodore.killian@kuleuven.vib.be>","tibble","Rda","depmap/mutationCalls_20Q4.rda","ExperimentHub, ExperimentData, ReproducibleResearch, RepositoryData, AssayDomainData, CopyNumberVariationData, DiseaseModel, CancerData, BreastCancerData, ColonCancerData, KidneyCancerData, LeukemiaCancerData, LungCancerData, OvarianCancerData, ProstateCancerDataOrganismData, Homo_sapiens_Data, PackageTypeData, SpecimenSource, CellCulture, Genome, Proteome, StemCell, Tissue","This dataset is from the 20Q4 release"
"metadata_20Q4","Metadata for cell lines in the 20Q4 DepMap release, for 0 genes, 1812 cell lines, 35 primary diseases and 39 lineages.","3.12","","CSV","https://ndownloader.figshare.com/files/25494443","Nov 20 2020","Homo sapiens",9606,TRUE,"Broad Institute","Theo Killian <theodore.killian@kuleuven.vib.be>","tibble","Rda","depmap/metadata_20Q4.rda","ExperimentHub, ExperimentData, ReproducibleResearch, RepositoryData, AssayDomainData, CopyNumberVariationData, DiseaseModel, CancerData, BreastCancerData, ColonCancerData, KidneyCancerData, LeukemiaCancerData, LungCancerData, OvarianCancerData, ProstateCancerDataOrganismData, Homo_sapiens_Data, PackageTypeData, SpecimenSource, CellCulture, Genome, Proteome, StemCell, Tissue","This dataset is from the 20Q4 release"
