Package: rSWeeP
Type: Package
Title: Spaced Words Projection (SWeeP)
Version: 1.22.0
Date: 2024-04-28
Authors@R: c(
    person(given = "Camila Pereira",
           family = "Perico",
           role = c("com", "cre", "aut", "cph"),
           email = "camilapp94@gmail.com",
           comment = c(ORCID = "https://orcid.org/0000-0003-0186-4022")),
    person(given = "Danrley Rafael",
            family = "Fernandes",
           role = "aut",
           email = "DanrleyRF@gmail.com"),
    person(given = "Mariane Gonçalves",
           family = "Kulik",
           role = "aut",
            comment = c(ORCID = "https://orcid.org/0009-0000-5432-3524") ),
    person(given = "Júlia Formighieri",   
           family = "Varaschin",
           role = "aut"),
    person(given = "Camilla Reginatto",
           family = "de Pierri",
           role = "aut",
            comment = c(ORCID = "https://orcid.org/0000-0002-6114-1734") ),
    person(given = "Ricardo Assunção",
           family = "Vialle",
           role = "aut",
            comment = c(ORCID = "https://orcid.org/0000-0003-3311-4197") ),
    person(given = "Roberto Tadeu",
           family = "Raittz",
           role = c("aut", "cph"),
           email = "raittz@ufpr.br",
            comment = c(ORCID = "https://orcid.org/0000-0002-5271-991X") )
            )
Maintainer: Camila P Perico <camilapp94@gmail.com>
Description: "Spaced Words Projection (SWeeP)" is a method for representing biological sequences using vectors 
        preserving inter-sequence comparability.
Depends: foreach, doParallel, parallel, Biostrings, methods, utils
Imports: tools, stringi,
Suggests: Rtsne, ape, Seurat, knitr, rmarkdown, tictoc, BiocStyle,
        testthat (>= 3.0.0)
Encoding: UTF-8
RoxygenNote: 7.3.2
VignetteBuilder: knitr
Config/testthat/edition: 3
License: GPL (>= 2)
git_url: https://git.bioconductor.org/packages/rSWeeP
git_branch: RELEASE_3_22
git_last_commit: a26c795
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.22
Date/Publication: 2025-10-29
NeedsCompilation: no
Packaged: 2025-10-30 06:10:27 UTC; biocbuild
Author: Camila Pereira Perico [com, cre, aut, cph] (ORCID:
    <https://orcid.org/0000-0003-0186-4022>),
  Danrley Rafael Fernandes [aut],
  Mariane Gonçalves Kulik [aut] (ORCID:
    <https://orcid.org/0009-0000-5432-3524>),
  Júlia Formighieri Varaschin [aut],
  Camilla Reginatto de Pierri [aut] (ORCID:
    <https://orcid.org/0000-0002-6114-1734>),
  Ricardo Assunção Vialle [aut] (ORCID:
    <https://orcid.org/0000-0003-3311-4197>),
  Roberto Tadeu Raittz [aut, cph] (ORCID:
    <https://orcid.org/0000-0002-5271-991X>)
