91fb6542452be3fda3133e80f5749428 *CONTRIBUTING.md
d35573350d74c63af7768541d7072bd2 *DESCRIPTION
b649951a4f869283adafff43e93f7a13 *LICENSE
c4a9e9e11ce1d42163537aea48613856 *NAMESPACE
4c5f236e0439e56af3372daa4aa15b57 *NEWS
a8c172191764d151d130aa9263992fd0 *R/batch_correction.R
d06d2cca4a30551a992cbae9608f5b3a *R/class_constructor.R
5f55d939001e5f8850be48f1da404c24 *R/data.R
a458369fa694ef9b8814946199d2bac1 *R/drift_correction.R
cbd3111fd82dd21afcbd4c45dfb4e374 *R/feature_clustering.R
5b5f4c500067d007f1c5a831bc183870 *R/logging.R
4f0b07528e7228d25389777f6a71d46b *R/merger.R
ba4e0a9b11dc317ca327906320be189a *R/quality_metrics.R
c095a8879bb3268747772b8b2a076246 *R/transformations.R
d444c40289f93b98fcc3b13475aa331f *R/utils.R
f65d01ec4d2fa2a4fc5d7b457e9199d4 *README.md
fa88ea0cf16765b90c118f37bca47304 *build/vignette.rds
fbf5d0dea59823b6ee3b9f7a2a8cf51b *data/hilic_neg_sample.rda
44d1efe87c6868355cd10a4f40a2e1bb *data/hilic_pos_sample.rda
fb409d71850e36c8711fd6f6fde83f52 *data/rp_neg_sample.rda
19839e8d7bcf374fcb49ca1edafd66be *data/rp_pos_sample.rda
787acffa4c0a684c1ef243b58cce2ed1 *data/toy_notame_set.rda
a751f0604d0032d27e53c783b44f296c *inst/CITATION
469d7d31adcb35bdfdb800b1faeb80ea *inst/doc/introduction.R
83671b6659b316ef110163448a39e211 *inst/doc/introduction.Rmd
e8cc29913464c3371979f8a8f037357a *inst/doc/introduction.html
a1c00bb6f8aaaf4246c0b609fa638119 *inst/doc/project_example.R
08a524ee164f5d5952ba9b14db920ddc *inst/doc/project_example.Rmd
0404bd1c5e6d40129edfa9d871378d52 *inst/doc/project_example.html
c1b00a52cd9c1dd49bafce6771ab14fa *inst/extdata/hilic_neg_sample.xlsx
2af5967c0c552c6068e9ae30b4d53ac9 *inst/extdata/hilic_pos_sample.xlsx
7b19a43d8bb54cbef6c2a815a17346c5 *inst/extdata/rp_neg_sample.xlsx
cf9ea42ee8e2625d6fc88043ecec422f *inst/extdata/rp_pos_sample.xlsx
077273e1d9447a295ab2398dce6f3481 *inst/extdata/sample_data_whole.xlsx
f4947e2991e3de84a940299779e275b5 *inst/extdata/toy_notame_set.xlsx
005b0cb7feb6de3bd280a54c2c9292d1 *inst/script/write_xlsx_files.R
f2afe7605f5c12ac7114682ed24ee6b5 *inst/testdata/easy_data.xlsx
158d1a07f8dd3671687cf5a46a7d18bd *inst/testdata/split_data.xlsx
f4e3286339f9018a8873348d248b1a7c *man/assess_quality.Rd
e272b92df0ab4395cc208c7726b321ac *man/citations.Rd
ffcc5f377016f8600ef704025c8f7ad8 *man/cluster_features.Rd
6387d43a6b8b9be36abbd57f3dc7334f *man/combined_data.Rd
8f9cdec73eb309871d086b1d7a28b757 *man/compress_clusters.Rd
ac741c6eb2ebefc228b49b27657ce02d *man/correct_drift.Rd
47a353a8c826102ca29f7dc649b23355 *man/drop_flagged.Rd
2b5e80389c35e5b1fe4fc148e0365bb4 *man/drop_qcs.Rd
0518df1f79fd293ce0cbed83dd1c9e61 *man/finish_log.Rd
3cf306a1c9ab26941876e5dffd2a5f16 *man/fix_MSMS.Rd
f74261667f6709376c56a1069564ea84 *man/fix_object.Rd
e3dbaf2fa296ea33372a4b500ec5516c *man/flag.Rd
e258eba870b01bb64ef23dc8ab7f1d23 *man/flag_contaminants.Rd
9b3eff0c4a57ac23c4557188e24d3ce4 *man/flag_detection.Rd
452652eee6c7fcfe252f0ef36b96dd06 *man/flag_quality.Rd
85cc0c6c6e51979be592f27dea9cf651 *man/flag_report.Rd
363845d67038da447a17ff589ccd99fe *man/import_from_excel.Rd
810cb25056e2bfd19637e00c9c14642c *man/impute_rf.Rd
ea4454bea2fff34527c20aeb9bb12400 *man/impute_simple.Rd
a7e6f45ea44e4107c7078ca12aac7bbc *man/init_log.Rd
d77e773aa31607afdf4e00a92c1509c9 *man/inverse_normalize.Rd
06804557459d739ce872de575186c3b2 *man/join_colData.Rd
a8e1f3cfa402af93641641e120c3662e *man/join_rowData.Rd
3feeda9386ce8bfe4afbb1e0d16fc963 *man/log_text.Rd
1cd0cfe316a126c8d8f6b373bfabee2f *man/mark_nas.Rd
e3f07fd1c8bfa7cd7151d0c17755066e *man/merge_notame_sets.Rd
817710f13c2c8e44be206470d3d82475 *man/notame-package.Rd
c5aa49eb0f248897c14c9417f8a9b0c7 *man/pca_bhattacharyya_dist.Rd
31e065c2365a62338f511065ed1aa051 *man/perform_repeatability.Rd
beba9bef187daebce29d339ecae5d99f *man/pqn_normalization.Rd
baa9b7a950e9c0401b5399b7364c68f1 *man/quality.Rd
d5459efbd431b8ff9dce261a061d0404 *man/ruvs_qc.Rd
802c65c10cb26611e2e55ab5f7e8c69e *man/toy_notame_set.Rd
958a2e58c658af8083a52c10f723ed98 *man/write_to_excel.Rd
7c79cca54089053dce8ef4a9417910c1 *tests/testthat.R
b0a56fe8b84d0560c30267015a5832b0 *tests/testthat/helper.R
157611e8f0bc62c6e56b41027fb212ae *tests/testthat/test_constructor.R
589e43abe4e77179691706c43405dc3c *tests/testthat/test_data_reading.R
2b49171e5874563a5b82545bb11caff0 *tests/testthat/test_finite_functions.R
a5df73fa621302796712e309e535bf20 *tests/testthat/test_logging.R
75f5857fcdb582b4a8eb45ba981f44d2 *tests/testthat/test_transformations.R
238679b5a9feed53991f689aa41c19f7 *vignettes/Data_input.png
83671b6659b316ef110163448a39e211 *vignettes/introduction.Rmd
08a524ee164f5d5952ba9b14db920ddc *vignettes/project_example.Rmd
33aa89c49cbdf268cc503330c84f0d56 *vignettes/references.bib
