@string{JASA= {Journal of the American Statistical Association}}
@string{JC = {Journal of Classification}}
@string{PNAS = {Proc. Natl. Acad. Sci.}}

@InCollection{Dudoit&Yang02,
  author = 	 {S. Dudoit and Y. H. Yang},
  title = 	 {Bioconductor {R} packages for exploratory analysis and normalization of c{DNA} microarray data},
  booktitle = 	 {The Analysis of Gene Expression Data: Methods and Software},
  OPTcrossref =  {},
  OPTkey = 	 {},
  OPTpages = 	 {},
  publisher =    {Springer, New York},
  year = 	 {2002},
  editor = 	 {G. Parmigiani and E. S. Garrett and R. A. Irizarry and S. L. Zeger},
  OPTvolume = 	 {},
  OPTnumber = 	 {},
  OPTseries = 	 {},
  OPTtype = 	 {},
  OPTchapter = 	 {},
  OPTaddress = 	 {},
  OPTedition = 	 {},
  OPTmonth = 	 {},
  OPTnote = 	 {},
  OPTannote = 	 {}
}


@Article{Dudoitetal02,
  author = 	 {S. Dudoit and Y. H. Yang and M. J. Callow and T. P. Speed},
  title = 	 {Statistical methods for identifying differentially expressed genes in replicated  c{DNA} microarray experiments},
  journal = 	 {Statistica Sinica},
  year = 	 {2002},
  OPTkey = 	 {},
  volume = 	 {12},
  number = 	 {1},
  pages = 	 {111--139},
  OPTmonth = 	 {},
  OPTnote = 	 {In press},
  OPTannote = 	 {}
}



@Article{NormNAR,
  author = 	 {Y. H. Yang and S. Dudoit and P. Luu and D. M. Lin and V. Peng and J. Ngai and T. P. Speed},
  title = 	 {Normalization for c{DNA} microarray data: a robust composite method addressing single and multiple slide systematic variation},
  journal = 	 {Nucleic Acids Research},
  year = 	 {2002},
  OPTkey = 	 {},
  volume = 	 {30},
  number = 	 {4},
  OPTpages = 	 {},
  OPTmonth = 	 {},
  OPTnote = 	 {},
  OPTannote = 	 {}
}

@InProceedings{Norm,
  author = 	 {Y. H. Yang and S. Dudoit and P. Luu and T. P. Speed},
  title = 	 {Normalization for c{DNA} microarray data},
  booktitle = 	 {Microarrays: Optical Technologies and Informatics},
  OPTcrossref =  {},
  OPTkey = 	 {},
  OPTpages = 	 {},
  year = 	 {2001},
  editor = 	 {Michael L. Bittner and Yidong Chen and Andreas N. Dorsel and Edward R. Dougherty},
  volume = 	 {4266},
  OPTnumber = 	 {},
  series = 	 {Proceedings of SPIE},
  OPTaddress = 	 {},
  month = 	 {May},
  OPTorganization = {SPIE},
  OPTpublisher = {},
  OPTnote = 	 {},
  OPTannote = 	 {}
}


@Article{Cleveland79,
  author = 	 {W. S. Cleveland},
  title = 	 {Robust locally weighted regression and smoothing scatterplots},
  journal = 	 JASA,
  year = 	 {1979},
  OPTkey = 	 {},
  volume = 	 {74},
  number = 	 {368},
  pages = 	 {829--836},
  OPTmonth = 	 {},
  OPTnote = 	 {},
  OPTannote = 	 {}
}




@Article{Image,
  author = 	 {Y. H. Yang and M. J. Buckley and S. Dudoit and T. P. Speed},
  title = 	 {Comparison of methods for image analysis on c{DNA} microarray data},
  journal = 	 {Journal of Computational and Graphical Statistic},
  year = 	 {2002},
  OPTkey = 	 {},
  volume = 	 {11},
  number = 	 {1},
  OPTpages = 	 {},
  OPTmonth = 	 {},
  OPTnote = 	 {},
  OPTannote = 	 {}
}

@Manual{Spot,
  title = 	 {The Spot user's guide},
  OPTkey = 	 {},
  author = 	 {M. J. Buckley},
  organization = {CSIRO Mathematical and Information Sciences},
  OPTaddress = 	 {},
  OPTedition = 	 {},
  month = 	 {August},
  year = 	 {2000},
  note = 	 {{\tt http://www.cmis.csiro.au/IAP/Spot/spotmanual.htm}},
  OPTannote = 	 {}
}
