param	value
###############
# LogReg Config
###############
## CONFIG.LS ##
cnvFile	
phFile	
geneIDFile	
klGeneFile	
klLociFile	
gsFile	
outputPath	
geneListFile	""
## PARAMS.LS ##
Kl	"ALL"
projectName	"NS"
gsUSet	""
cnvType	1
covariates	"SEX"
klOlp	0.5	
corrections	"no_corr,uni_gc,tot_l,cnvn_ml"
geneSep	";"
geneSetSizeMax	1500
geneSetSizeMin	25
filtGs	"NO"
covInterest	"SEX"
eventThreshold	1
fLevels	10
cores	4
parallel	"YES"
CNVevents	5
############
# Viz Config
############
FDRThreshold	0.1
plotHeight	13
gsList	
outputPathViz	
labelSize	0.7
correctionViz	"no_corr,uni_gc,tot_l,cnvn_ml"
############
# ENR Config
############
pVal	"Pvalue_U_dev"
FDR	"FDR_BH_U"
coeff	"Coeff_U"
keepCoeff	"YES"
filtGsEnr	"NO"
outputPathEnr	
minCaseCount	0
maxControlCount	0
minRatio	0
