GeneName1	GeneName2	chr1	Breakpoint1	strand1	chr2	Breakpoint2	strand2	EnsemblGene1	EnsemblGene2	crossingreads	spanningreads	mean.insertsize	homology	fusiontype	Blacklist	InfoGene1	InfoGene2	JunctionSequence	GeneExpr1	GeneExpr2	GeneExpr_Fused	ES	GJS	US	EricScore
PPIA	CYP11A1	7	44796786	+	15	74361634	-	ENSG00000196262	ENSG00000140459	117	26	-31		inter-chromosomal		peptidylprolyl isomerase A (cyclophilin A) [Source:HGNC Symbol;Acc:HGNC:9253]	cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:2590]	accgtgttcttcgacattgccgtcgacggcgagcccttgggccgcgtctcCTTGTCTGCAAACAGCTCAAAGGAGACGTGACCCAAGGGCTCGCCGTGAC	625.52	7.42	4118.13	0.0037	0.1409	0.222222222222222	0.473687722690875
H3F3C	H3F3B	12	31792184	-	17	75779758	-	ENSG00000188375	ENSG00000132475	244	5	94.4		inter-chromosomal		H3 histone, family 3C [Source:HGNC Symbol;Acc:HGNC:33164]	H3 histone, family 3B (H3.3B) [Source:HGNC Symbol;Acc:HGNC:4765]	ntcgggcagcggaagcagcgcggaggtcggagaagtggcctaaaacttcgTTCGTTGGGCGGTGCTGGTTTTTCGCTCGTCGACTGCGGCTCTTCCTCGG	0.48	125.4	638.58	0.981	0.7545	0.0204918032786885	0.0886890985167667
RPL39	ZNF808	X	119786620	-	19	52564216	+	ENSG00000198918	ENSG00000198482	3	26	178.67	ENSG00000087589 (57%), ENSG00000163923 (50%), ENSG00000198346 (49%)	inter-chromosomal		ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:10350]	zinc finger protein 808 [Source:HGNC Symbol;Acc:HGNC:33230]	gatggcacacatatttatgctgtctgaaggtcacgatcatgttaccatatCAAGCTGGGTCTATAAGGAATTGCACGTGAGATGGCACACATATTTATGC	19.34	13.7	1625.17	0.659	0.5707	0.115384615384615	0.311543060089643
NPM1	CLEC2D	5	171392967	+	12	9695858	+	ENSG00000181163	ENSG00000069493	2459	68	101.06	ENSG00000156802 (71%), ENSG00000106819 (45%), ENSG00000145242 (43%), ENSG00000102755 (32%), ENSG00000047410 (34%), ENSG00000083312 (36%), ENSG00000215271 (33%), ENSG00000280739 (41%), ENSG00000184432 (20%)	inter-chromosomal	Frequency: 0.032	nucleophosmin (nucleolar phosphoprotein B23, numatrin) [Source:HGNC Symbol;Acc:HGNC:7910]	C-type lectin domain family 2, member D [Source:HGNC Symbol;Acc:HGNC:14351]	tgatgacgatgatgatgaagaggatgatgatgaagatgatgatgatgatgATGATGATGATGATGAAGATGATGATGATGATGATGACGAGGAAGCTGAA	0.24	93.09	855.19	0.7971	0.7563	0.0276535176901179	0.404366371104971
VMAC	CAPS	19	5905080	+	19	5914384	+	ENSG00000187650	ENSG00000105519	3	4	77.5		Read-Through		vimentin-type intermediate filament associated coiled-coil protein [Source:HGNC Symbol;Acc:HGNC:33803]	calcyphosine [Source:HGNC Symbol;Acc:HGNC:1487]	cgaccagcagctgcgcgccgccctagacgaactgggtcgcgccaaggaccGCTGCCCAGAGCCCAGACCAAGCATGGACGCCGTGGATGCCACCATGGAG	25.99	24.88	5.26	0.8441	0.4795	0.75	0.905241360906258
SLC7A5	SMG1	16	87868885	-	16	18900044	-	ENSG00000103257	ENSG00000157106	13	2	80.89		intra-chromosomal		solute carrier family 7 (amino acid transporter light chain, L system), member 5 [Source:HGNC Symbol;Acc:HGNC:11063]	SMG1 phosphatidylinositol 3-kinase-related kinase [Source:HGNC Symbol;Acc:HGNC:30045]	ctgcccggtgcccgaggaggcagccaagctcgtggcctgcctctgcgtgcATTGACTTGATGCAAAACATCACAAAGGCTCCATATTATACAAACTGATA	70.69	42.36	5.34	0.7606	0.3989	0.153846153846154	0.54040727705193
KHSRP	IGF2BP3	19	6413755	-	7	23470467	-	ENSG00000088247	ENSG00000136231	29	1	41.74		inter-chromosomal		KH-type splicing regulatory protein [Source:HGNC Symbol;Acc:HGNC:6316]	insulin-like growth factor 2 mRNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:28868]	gagcaaagcagaacttataaaattatatatatatatattaaaaagtctctGGCCGAAGCCAAAGGGGTTGGGAAGGAAGAGACAAAAAGTAGTTTTTTCC	271.1	20.93	226.65	0.0465	0.1464	0.0344827586206897	0.821969469313655
HMG20B	MFSD12	19	3574042	+	19	3573800	-	ENSG00000064961	ENSG00000161091	7	1	60.19		intra-chromosomal		high mobility group 20B [Source:HGNC Symbol;Acc:HGNC:5002]	major facilitator superfamily domain containing 12 [Source:HGNC Symbol;Acc:HGNC:28299]	tctaaggtcccgcccacttccactccttgggggatgggggcggggcctagCTCCTCCTCGTGGGACCCCTTCTCGCCCGCGCGTGGACCCTCGCCGCGCT	250.29	54.15	76.11	0.0465	0.1464	0.142857142857143	0.412011770692385
SF3A2	AMH	19	2247869	+	19	2250337	+	ENSG00000104897	ENSG00000104899	7	12	118.04		Read-Through		splicing factor 3a, subunit 2, 66kDa [Source:HGNC Symbol;Acc:HGNC:10766]	anti-Mullerian hormone [Source:HGNC Symbol;Acc:HGNC:464]	ccctgctggcccccctggggtgaagcggcctccacccccgctgatgaacgTGACCTGGGAGCCAACACCCTCGCTGAGGTTCCAGGAGCCCCCGCCTGGA	101.71	46.62	173.28	0.9588	0.7242	0.583333333333333	0.870595811624448
LRRFIP2	CAV3	3	37094792	-	3	8841344	+	ENSG00000093167	ENSG00000182533	3	8	39.25		intra-chromosomal		leucine rich repeat (in FLII) interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:6703]	caveolin 3 [Source:HGNC Symbol;Acc:HGNC:1529]	gggacaccagcagcttaatagatccagacacttcattaagtgaattgcggATAACATCCTGCTGGTTACTGATCATACCTGTTGATGAATTCCAAAAGAG	31.53	1.08	92.98	0.8691	0.5052	0.375	0.69652638597879
