b451c06d76c606c10a38ca74c0b8df43 *DESCRIPTION
a9eea4ad4c64fcdf999b441f2da7a2b6 *NAMESPACE
0c1c06bc01456e4fe3c3e489e0576203 *NEWS
732a884fc40a656a8362ff35886365ca *R/atsnp-package.R
6d4f64db1d985c11821ecba539e6077a *R/data.R
2703da7ee9985d29eeb0aa1db056e90d *R/graphic.R
11ea8c2349ac434c8380ba8ef7e10e32 *R/motif_analysis.R
acbaec59695dc1f75b02b9c3aa1ad5be *R/utility.R
d60eb6c36c3064037df4d225a88ffad8 *README.md
c64942a2181830a084375dd76bdeb7bd *build/vignette.rds
bbb99f3bf7cd45b1a73da42e9c037a4b *data/default_par.rda
01a1fc6b46a1eea2cf3b2d75c1db2139 *data/encode_library.rda
d1b0c66d4ed70f74c3fd5d020a5c70bf *data/example.rda
da347b2b2153f984ff625251a427fc28 *data/jaspar_library.rda
3b42676b5fc625d782333e4269102481 *inst/CITATION
18eb1415cf612839dbeccebe89971ff2 *inst/doc/atsnp-vignette.R
01d964b66a1f0361b8d130d393b4c2c6 *inst/doc/atsnp-vignette.html
52dcd81889b893c3568d3b8b2ab83394 *inst/doc/atsnp-vignette.rmd
eaa427fb47fa657c5d39b170893f3b14 *man/ComputeMotifScore.Rd
552c5d104c85ff4706d3afee7fbc387a *man/ComputePValues.Rd
02948865d2e21a84a6595979f51b76ee *man/GetIUPACSequence.Rd
259c8bd6e3a613d52000575ee7df9756 *man/LoadFastaData.Rd
b7c9620998c2280ed975f9004db49432 *man/LoadMotifLibrary.Rd
84746cc1b676ec6ed513f7c249f2948c *man/LoadSNPData.Rd
c62a32a7fca7fd8d37a25654b5a888c3 *man/MatchSubsequence.Rd
de93c6cf74d5df94c20acc5e5423c6ab *man/atSNP-package.Rd
0218739383c76d0883c2f2adfae89a61 *man/dtMotifMatch.Rd
2af13a89e98cc43f984969e4946f18cb *man/encode_motif.Rd
10dc7198c478eac2248ae67955d2ff0c *man/encode_motifinfo.Rd
9561f5273db7ce61d21bcb33cbd05404 *man/jaspar_motif.Rd
17a91619f8ce3770661fce64a045a93f *man/jaspar_motifinfo.Rd
550ff8b01b823aec850675ff979cf5a6 *man/motif_library.Rd
1a2543e3ce86f5c49497cd0ad1d55b1b *man/motif_match.Rd
f9aeb8927c7da30a5dfc758e0baa80bb *man/motif_scores.Rd
e430760d4f96d6381a3bca7bdb2c2372 *man/plotMotifMatch.Rd
be96fee82089f095a6ddd15b9df4ce5b *man/prior.Rd
23e8a0f8e338a3217e9c8909843d41eb *man/snpInfo.Rd
16f5ae6741100eb9eb071d17487b0114 *man/snp_tbl.Rd
40e84e5a98dafe53c92506a0a6ccb16e *man/transition.Rd
f2bf50f7bf9866f50533e25dd023940a *src/ImportanceSample.cpp
78d9116f9c0e5e45a66685448e33c455 *src/ImportanceSampleChange.cpp
05a5df407d5f7947f72a337e71c0b689 *src/ImportanceSampleDiff.cpp
c0f1387efd99fcf85ffb36f4954bf1ac *src/MotifScore.cpp
be5dbf9d4d97354c4094d3202b860a69 *src/MotifScore.h
dea4c8059432011719f53d1e766b2834 *tests/test.R
bc1b96ab81df15f18eee69df94b8c991 *tests/test_change.R
d3387266679ab33971ccfbe71ed97bec *tests/test_diff.R
81a02803ae32f2a21397a0d0091bff5f *tests/test_is.R
52dcd81889b893c3568d3b8b2ab83394 *vignettes/atsnp-vignette.rmd
10c4bb750ec55dd56c9facd86b5aab5c *vignettes/document.bib
e8af73603d5c055d67faa3405f72c6f0 *vignettes/natbib.sty
