Package: sketchR
Version: 1.5.2
Date: 2025-08-12
Title: An R interface for python subsampling/sketching algorithms
Authors@R: c(
    person("Charlotte", "Soneson", email = "charlottesoneson@gmail.com",
        role = c("aut", "cre"), comment = c(ORCID = "0000-0003-3833-2169")),
    person("Michael", "Stadler", email = "michael.stadler@fmi.ch",
           role = "aut", comment = c(ORCID = "0000-0002-2269-4934")),
    person("Friedrich Miescher Institute for Biomedical Research", 
           role = "cph"))
License: MIT + file LICENSE
Description: Provides an R interface for various subsampling algorithms 
    implemented in python packages. Currently, interfaces to the geosketch 
    and scSampler python packages are implemented. In addition it also
    provides diagnostic plots to evaluate the subsampling.
Imports: basilisk, Biobase, DelayedArray, dplyr, ggplot2, methods,
        reticulate, rlang, scales, stats
Suggests: rmarkdown, knitr, testthat (>= 3.0.0), TENxPBMCData, scuttle,
        scran, scater, SingleR, celldex, cowplot, SummarizedExperiment,
        beachmat.hdf5, BiocStyle, BiocManager, SingleCellExperiment,
        snifter, uwot, bluster, class
URL: https://github.com/fmicompbio/sketchR
BugReports: https://github.com/fmicompbio/sketchR/issues
RoxygenNote: 7.3.2
Encoding: UTF-8
StagedInstall: no
Config/testthat/edition: 3
VignetteBuilder: knitr
biocViews: SingleCell
git_url: https://git.bioconductor.org/packages/sketchR
git_branch: devel
git_last_commit: 1110ef9
git_last_commit_date: 2025-08-12
Repository: Bioconductor 3.22
Date/Publication: 2025-08-13
NeedsCompilation: no
Packaged: 2025-08-14 02:15:44 UTC; biocbuild
Author: Charlotte Soneson [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-3833-2169>),
  Michael Stadler [aut] (ORCID: <https://orcid.org/0000-0002-2269-4934>),
  Friedrich Miescher Institute for Biomedical Research [cph]
Maintainer: Charlotte Soneson <charlottesoneson@gmail.com>
Built: R 4.5.1; ; 2025-08-14 13:58:44 UTC; windows
