Package: isomiRs
Version: 1.37.1
Date: 2025-08-01
Type: Package
Title: Analyze isomiRs and miRNAs from small RNA-seq
Description: Characterization of miRNAs and isomiRs, clustering and
   differential expression.
biocViews: miRNA, RNASeq, DifferentialExpression, Clustering,
        ImmunoOncology
BugReports: https://github.com/lpantano/isomiRs/issues
Suggests: knitr, rmarkdown, org.Mm.eg.db, pheatmap, BiocStyle, testthat
Depends: R (>= 4.4), SummarizedExperiment
Imports: AnnotationDbi, BiocGenerics, Biobase, broom, cluster, cowplot,
        DEGreport, DESeq2, IRanges, dplyr, GenomicRanges, gplots,
        ggplot2, gtools, gridExtra, grid, grDevices, graphics, GGally,
        limma, methods, RColorBrewer, readr, reshape, rlang, stats,
        stringr, S4Vectors, tidyr, tibble
LazyData: true
Authors@R: c(
    person("Lorena", "Pantano",
           email = "lorena.pantano@gmail.com",
           role = c("aut", "cre")),
    person("Georgia", "Escaramis", role = "aut", comment="CIBERESP - CIBER Epidemiologia y Salud Publica"))
License: MIT + file LICENSE
VignetteBuilder: knitr
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Encoding: UTF-8
git_url: https://git.bioconductor.org/packages/isomiRs
git_branch: devel
git_last_commit: ffb8b4b
git_last_commit_date: 2025-08-01
Repository: Bioconductor 3.22
Date/Publication: 2025-08-03
NeedsCompilation: no
Packaged: 2025-08-03 23:59:27 UTC; biocbuild
Author: Lorena Pantano [aut, cre],
  Georgia Escaramis [aut] (CIBERESP - CIBER Epidemiologia y Salud
    Publica)
Maintainer: Lorena Pantano <lorena.pantano@gmail.com>
Built: R 4.5.1; ; 2025-08-04 13:28:00 UTC; windows
