# Automatic scoring and classification of cell-based assay images

## Documentation for package ‘islify’ version 1.1.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

islify-package | Automatic scoring and classification of cell-based assay images
getIntensityCutoff | Identification of an intensity cutoff for a whole experiment
getQuantileIntensities | Get information about the quantiles for the intensity values for all colors in an image
getSizeCutoff | Identification of a suitable size cutoff for cells
islify | Generation of islands and island derived statistics
negImage | A few CASPR2-negative cells
posImage | A few CASPR2-positive cells
saveImage | Saving individually coloured png images from raw image input
zprime | Compute the Z'-factor quality score