immunoClust-package	immunoClust-package
addLevel<-	immunoMeta.methods
addLevel<-.immunoMeta	immunoMeta.methods
aposteriori	generics
aposteriori,immunoClust-method	immunoClust.methods
aposteriori,immunoMeta-method	immunoMeta.methods
aposteriori.immunoClust	immunoClust.methods
aposteriori.immunoMeta	immunoMeta.methods
bhattacharyya.coeff	bhattacharyya
bhattacharyya.dist	bhattacharyya
bhattacharyya.prob	bhattacharyya
cell.Classify	cell.FitModel
cell.classifyAll	cell.process
cell.ClustData	cell.ClustData
cell.EMstep	cell.EM
cell.EMt	cell.EM
cell.Estep	cell.EM
cell.FitModel	cell.FitModel
cell.hclust	cell.hclust
cell.InitialModel	cell.process
cell.MajorIterationLoop	cell.process
cell.MajorIterationTrans	cell.process
cell.MEstep	cell.ME
cell.Mstep	cell.ME
cell.process	cell.process
cell.SubClustering	cell.SubClustering
cell.TestSubCluster	cell.SubClustering
cells	immunoClust.methods
cells,immunoClust-method	immunoClust.methods
classified	immunoMeta.methods
classified,immunoMeta-method	immunoMeta.methods
classified.immunoMeta	immunoMeta.methods
clusterCoeff	generics
clusterCoeff,immunoMeta-method	immunoMeta.methods
clusterDist	generics
clusterDist,immunoMeta-method	immunoMeta.methods
clusterProb	generics
clusterProb,immunoMeta-method	immunoMeta.methods
clusters	immunoMeta.methods
clusters,immunoMeta-method	immunoMeta.methods
clusters.immunoMeta	immunoMeta.methods
dat.exp	dat.exp
dat.fcs	dat.fcs
dat.meta	dat.meta
datSplom	splom.immunoClust
desc	immunoMeta.methods
desc,immunoMeta-method	immunoMeta.methods
desc.immunoMeta	immunoMeta.methods
desc<-	immunoMeta.methods
desc<-,immunoMeta-method	immunoMeta.methods
desc<-.immunoMeta	immunoMeta.methods
descFull	immunoMeta.methods
descFull,immunoMeta-method	immunoMeta.methods
descFull.immunoMeta	immunoMeta.methods
events	immunoMeta.methods
events,immunoClust-method	immunoClust.methods
events,immunoMeta-method	immunoMeta.methods
events.immunoClust	immunoClust.methods
events.immunoMeta	immunoMeta.methods
finalize	immunoMeta.methods
finalize,immunoMeta-method	immunoMeta.methods
finalize.immunoMeta	immunoMeta.methods
findLevel	immunoMeta.methods
findLevel,immunoMeta-method	immunoMeta.methods
findLevel.immunoMeta	immunoMeta.methods
immunoClust	immunoClust-package
immunoClust-class	immunoClust.object
immunoClust.object	immunoClust.object
immunoClust.package	immunoClust-package
immunoMeta	immunoMeta.object
immunoMeta-class	immunoMeta.object
immunoMeta-object	immunoMeta.object
immunoMeta.class	immunoMeta.object
immunoMeta.object	immunoMeta.object
label	generics
label,immunoClust-method	immunoClust.methods
label,immunoMeta-method	immunoMeta.methods
label.immunoClust	immunoClust.methods
label.immunoMeta	immunoMeta.methods
level	immunoMeta.methods
level,immunoMeta-method	immunoMeta.methods
level.immunoMeta	immunoMeta.methods
level<-	immunoMeta.methods
level<-.immunoMeta	immunoMeta.methods
meta.Clustering	meta.clustering
meta.export	meta.export
meta.exprs	meta.exprs
meta.freqTable	meta.export
meta.hclust	meta.hclust
meta.majorEvents	meta.export
meta.ME	meta.ME
meta.Normalize	meta.normalize
meta.numClusters	meta.export
meta.numEvents	meta.export
meta.parMFI	meta.export
meta.process	meta.process
meta.RegNorm	meta.regnorm
meta.relEvents	meta.export
meta.relEvents2	meta.export
meta.relEvents3	meta.export
meta.relParent	meta.export
meta.SON.clustering	SON.clustering
meta.SON.combineClustering	SON.combineClustering
meta.SubClustering	meta.SubClustering
meta.TestSubCluster	meta.SubClustering
move<-	immunoMeta.methods
move<-.immunoMeta	immunoMeta.methods
mu	generics
mu,immunoClust-method	immunoClust.methods
mu,immunoMeta-method	immunoMeta.methods
mu.immunoClust	immunoClust.methods
mu.immunoMeta	immunoMeta.methods
ncls	generics
ncls,immunoClust-method	immunoClust.methods
ncls,immunoMeta-method	immunoMeta.methods
ncls.immunoClust	immunoClust.methods
ncls.immunoMeta	immunoMeta.methods
nobs	generics
nobs,immunoClust-method	immunoClust.methods
nobs,immunoMeta-method	immunoMeta.methods
nobs.immunoClust	immunoClust.methods
nobs.immunoMeta	immunoMeta.methods
npar	generics
npar,immunoClust-method	immunoClust.methods
npar,immunoMeta-method	immunoMeta.methods
npar.immunoClust	immunoClust.methods
npar.immunoMeta	immunoMeta.methods
nsam	generics
nsam,immunoMeta-method	immunoMeta.methods
nsam.immunoMeta	immunoMeta.methods
parameters	generics
parameters,immunoClust-method	immunoClust.methods
parameters,immunoMeta-method	immunoMeta.methods
parameters.immunoClust	immunoClust.methods
parameters.immunoMeta	immunoMeta.methods
parameters<-	generics
parameters<-,immunoClust,character-method	immunoClust.methods
parameters<-,immunoMeta,character-method	immunoMeta.methods
parameters<-.immunoClust	immunoClust.methods
parameters<-.immunoMeta	immunoMeta.methods
parent<-	immunoMeta.methods
parent<-.immunoMeta	immunoMeta.methods
parent<-.immunoMeta-method	immunoMeta.methods
plot,immunoClust,missing-method	plot.immunoClust
plot,immunoClust-method	plot.immunoClust
plot,immunoMeta,missing-method	plot.immunoMeta
plot,immunoMeta-method	plot.immunoMeta
plot.immunoClust	plot.immunoClust
plot.immunoMeta	plot.immunoMeta
prop	immunoMeta.methods
prop,immunoMeta-method	immunoMeta.methods
prop.immunoMeta	immunoMeta.methods
prop<-	immunoMeta.methods
prop<-,immunoMeta-method	immunoMeta.methods
prop<-.immunoMeta	immunoMeta.methods
remove<-	immunoMeta.methods
remove<-.immunoMeta	immunoMeta.methods
removed.above	cell.removed
removed.below	cell.removed
sam_clsEvents	generics
sam_clsEvents,immunoMeta-method	immunoMeta.methods
sam_clsEvents.immunoMeta	immunoMeta.methods
sam_clsMu	generics
sam_clsMu,immunoMeta-method	immunoMeta.methods
sam_clsMu.immunoMeta	immunoMeta.methods
sam_clsSigma	generics
sam_clsSigma,immunoMeta-method	immunoMeta.methods
sam_clsSigma.immunoMeta	immunoMeta.methods
sam_clsWeights	generics
sam_clsWeights,immunoMeta-method	immunoMeta.methods
sam_clsWeights.immunoMeta	immunoMeta.methods
sam_ncls	generics
sam_ncls,immunoMeta-method	immunoMeta.methods
sam_ncls.immunoMeta	immunoMeta.methods
show	immunoClust.object
show,immunoClust-method	immunoClust.object
show,immunoMeta-method	immunoMeta.object
show.immunoClust	immunoClust.object
show.immunoMeta	immunoMeta.object
sigma	generics
sigma,immunoClust-method	immunoClust.methods
sigma,immunoMeta-method	immunoMeta.methods
sigma.immunoClust	immunoClust.methods
sigma.immunoMeta	immunoMeta.methods
splom	splom.immunoClust
splom,immunoClust,flowFrame-method	splom.immunoClust
splom,immunoClust,matrix-method	splom.immunoClust
splom,immunoClust,missing-method	splom.immunoClust
splom.immunoClust	splom.immunoClust
subset	generics
subset,immunoClust-method	immunoClust.methods
subset,immunoMeta-method	immunoMeta.methods
subset.immunoClust	immunoClust.methods
subset.immunoMeta	immunoMeta.methods
summary	immunoClust.object
summary,immunoClust-method	immunoClust.object
summary,immunoMeta-method	immunoMeta.object
summary.immunoClust	immunoClust.object
summary.immunoMeta	immunoMeta.object
trans.ApplyToData	trans.ApplyToData
trans.FitToData	trans.FitToData
transfer<-	immunoMeta.methods
transfer<-,immunoMeta,immunoMeta-method	immunoMeta.methods
transfer<-.immunoMeta	immunoMeta.methods
transformParams	generics
transformParams,immunoClust-method	immunoClust.methods
transformParams,immunoMeta-method	immunoMeta.methods
transformParams.immunoClust	immunoClust.methods
transformParams.immunoMeta	immunoMeta.methods
unclassified	immunoMeta.methods
unclassified,immunoMeta-method	immunoMeta.methods
unclassified.immunoMeta	immunoMeta.methods
weights	generics
weights,immunoClust-method	immunoClust.methods
weights,immunoMeta-method	immunoMeta.methods
weights.immunoClust	immunoClust.methods
weights.immunoMeta	immunoMeta.methods
