# Spatially-aware quality control for spatial transcriptomics

## Documentation for package ‘SpotSweeper’ version 1.5.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

biased_spots | Biased Spots Data
DLPFC_artifact | human DLPFC dataset with a technical artifact (hangnail).
findArtifacts | Identify and annotate artifacts in spatial transcriptomics data
flagVisiumOutliers | Flag Visium Outliers in SpatialExperiment Objects
localOutliers | localOutliers Function
localVariance | localVariance Function
plotQCmetrics | Plot QC metrics for a Single Sample in a SpatialExperiment object
plotQCpdf | Plot Outlier Metrics to PDF