Package: RedeR
Type: Package
Title: Interactive visualization and manipulation of nested networks
Version: 3.5.0
Authors@R: 
    c(person("Xin", "Wang", role = "ctb"),
      person("Florian", "Markowetz", role = "ctb"),
      person("Mauro", "Castro", role = c("aut", "cre"),
              email = "mauro.a.castro@gmail.com",
              comment = c(ORCID = "0000-0003-4942-8131")))
Depends: R (>= 4.0), methods
Imports: scales, igraph
Suggests: knitr, rmarkdown, markdown, BiocStyle, TreeAndLeaf
SystemRequirements: Java Runtime Environment (Java>= 11)
Description: RedeR is an R-based package combined with a stand-alone Java application for interactive visualization and manipulation of nested networks. Graph, node, and edge attributes can be configured using either graphical or command-line methods, following igraph syntax rules.
License: GPL-3
biocViews: GUI, GraphAndNetwork, Network, NetworkEnrichment,
        NetworkInference, Software, SystemsBiology
VignetteBuilder: knitr
URL: https://doi.org/10.1186/gb-2012-13-4-r29
Collate: AllChecks.R AllValidations.R AllClasses.R AllGenerics.R
        internalLegendMethods.R internalOtherMethods.R
        exportedCallMethods.R exportedOtherMethods.R
        exportedAddGraphMethods.R exportedGetGraphMethods.R
        exportedRelaxMethods.R exportedNestMethods.R
        exportedAttributeSeters.R exportedWrappers.R
        deprecatedFunctions.R Misc.R zzz.R
Encoding: UTF-8
RoxygenNote: 7.3.1
git_url: https://git.bioconductor.org/packages/RedeR
git_branch: devel
git_last_commit: 1473f33
git_last_commit_date: 2025-04-15
Repository: Bioconductor 3.22
Date/Publication: 2025-06-04
NeedsCompilation: no
Packaged: 2025-06-05 01:33:47 UTC; biocbuild
Author: Xin Wang [ctb],
  Florian Markowetz [ctb],
  Mauro Castro [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-4942-8131>)
Maintainer: Mauro Castro <mauro.a.castro@gmail.com>
Built: R 4.5.0; ; 2025-06-05 13:48:14 UTC; windows
