Type: Package
Package: ROSeq
Title: Modeling expression ranks for noise-tolerant differential
        expression analysis of scRNA-Seq data
Version: 1.21.0
Authors@R: c(person("Krishan", "Gupta", 
    email = "krishang@iiitd.ac.in", role = c("aut","cre")),
    person("Manan", "Lalit", 
    email = "manan.lalit@gmail.com", role = c("aut")),
    person("Aditya", "Biswas", 
    email = "Adbiswa@microsoft.com", role = c("aut")),
    person("Abhik", "Ghosh", 
    email = "abhianik@gmail.com", role = c("aut")),
    person("Debarka", "Sengupta", 
    email = "debarka@gmail.com", role = c("aut")))
Description: ROSeq - A rank based approach to modeling gene expression
    with filtered and normalized read count matrix. ROSeq takes
    filtered and normalized read matrix and cell-annotation/condition
    as input and determines the differentially expressed genes between 
    the contrasting groups of single cells. One of the input parameters
    is the number of cores to be used.
URL: https://github.com/krishan57gupta/ROSeq
BugReports: https://github.com/krishan57gupta/ROSeq/issues
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.1
Depends: R (>= 4.0)
biocViews: GeneExpression, DifferentialExpression, SingleCell
Imports: pbmcapply, edgeR, limma
Suggests: knitr, rmarkdown, testthat, RUnit, BiocGenerics
VignetteBuilder: knitr
git_url: https://git.bioconductor.org/packages/ROSeq
git_branch: devel
git_last_commit: 460dc67
git_last_commit_date: 2025-04-15
Repository: Bioconductor 3.22
Date/Publication: 2025-06-04
NeedsCompilation: no
Packaged: 2025-06-05 01:49:20 UTC; biocbuild
Author: Krishan Gupta [aut, cre],
  Manan Lalit [aut],
  Aditya Biswas [aut],
  Abhik Ghosh [aut],
  Debarka Sengupta [aut]
Maintainer: Krishan Gupta <krishang@iiitd.ac.in>
Built: R 4.5.0; ; 2025-06-05 13:53:10 UTC; windows
