Package: QTLExperiment
Type: Package
Date: 2025-03-07
Title: S4 classes for QTL summary statistics and metadata
Version: 2.1.1
Authors@R: c(
    person("Christina", "Del Azodi", role=c("aut"), email="cazodi@svi.edu.au"), 
    person("Davis","McCarthy", role=c("ctb"), email="dmccarthy@svi.edu.au"),
    person("Amelia","Dunstone", role=c("cre", "aut"), email="amelia.dunstone@svi.edu.au", comment=c(ORCID="0009-0009-6426-1529")))
License: GPL-3
URL: https://github.com/dunstone-a/QTLExperiment
BugReports: https://github.com/dunstone-a/QTLExperiment/issues
Encoding: UTF-8
Depends: SummarizedExperiment
Imports: methods, rlang, checkmate, dplyr, collapse, vroom, tidyr,
        tibble, utils, stats, ashr, S4Vectors, BiocGenerics
Suggests: testthat, BiocStyle, knitr, rmarkdown, covr
Description: QLTExperiment defines an S4 class for storing and manipulating summary statistics from QTL mapping experiments in one or more states.
    It is based on the 'SummarizedExperiment' class and contains functions for creating, merging, and subsetting objects.
    'QTLExperiment' also stores experiment metadata and has checks in place to ensure that transformations apply correctly.
biocViews: FunctionalGenomics, DataImport, DataRepresentation,
        Infrastructure, Sequencing, SNP, Software
VignetteBuilder: knitr
RoxygenNote: 7.3.2
git_url: https://git.bioconductor.org/packages/QTLExperiment
git_branch: devel
git_last_commit: 38de9a9
git_last_commit_date: 2025-07-14
Repository: Bioconductor 3.22
Date/Publication: 2025-07-14
NeedsCompilation: no
Packaged: 2025-07-15 01:25:15 UTC; biocbuild
Author: Christina Del Azodi [aut],
  Davis McCarthy [ctb],
  Amelia Dunstone [cre, aut] (ORCID:
    <https://orcid.org/0009-0009-6426-1529>)
Maintainer: Amelia Dunstone <amelia.dunstone@svi.edu.au>
Built: R 4.5.1; ; 2025-07-15 13:41:18 UTC; windows
