Package: MSPrep
Title: Package for Summarizing, Filtering, Imputing, and Normalizing
        Metabolomics Data
Version: 1.19.0
Authors@R: 
  c(person("Max", "McGrath",
           email = "max.mcgrath@ucdenver.edu",
           role = c("aut", "cre")),
    person("Matt", "Mulvahill",
           email = "matt.mulvahill@gmail.com",
           role = c("aut")),
    person("Grant", "Hughes",
           email = "",
           role = c("aut")),
    person("Sean", "Jacobson", 
           email = "jacobsonseanr@gmail.com",
           role = c("aut")),
    person("Harrison", "Pielke-lombardo",
           email = "harrison.pielke-lombardo@cuanschutz.edu",
           role = c("aut")),
    person("Katerina", "Kechris",
           email = "Katerina.Kechris@cuanschutz.edu",
           role = c("aut", "cph", "ths")))
Description: 
  Package performs summarization of replicates, filtering by frequency, several
  different options for imputing missing data, and a variety of options for 
  transforming, batch correcting, and normalizing data.
URL: https://github.com/KechrisLab/MSPrep
BugReports: https://github.com/KechrisLab/MSPrep/issues
Depends: R (>= 4.1.0)
Imports: SummarizedExperiment, S4Vectors, pcaMethods (>= 1.24.0), crmn,
        preprocessCore, dplyr (>= 0.7), tidyr, tibble (>= 1.2),
        magrittr, rlang, stats, stringr, methods, missForest, sva, VIM,
Suggests: BiocStyle, knitr, rmarkdown, testthat (>= 1.0.2)
VignetteBuilder: knitr
LazyData: false
NeedsCompilation: no
License: GPL-3
biocViews: Metabolomics, MassSpectrometry, Preprocessing
Encoding: UTF-8
RoxygenNote: 7.1.2
git_url: https://git.bioconductor.org/packages/MSPrep
git_branch: devel
git_last_commit: 1d38ba2
git_last_commit_date: 2025-04-15
Repository: Bioconductor 3.22
Date/Publication: 2025-06-04
Packaged: 2025-06-05 00:37:05 UTC; biocbuild
Author: Max McGrath [aut, cre],
  Matt Mulvahill [aut],
  Grant Hughes [aut],
  Sean Jacobson [aut],
  Harrison Pielke-lombardo [aut],
  Katerina Kechris [aut, cph, ths]
Maintainer: Max McGrath <max.mcgrath@ucdenver.edu>
Built: R 4.5.0; ; 2025-06-05 13:29:42 UTC; windows
