Package: ERSSA
Type: Package
Title: Empirical RNA-seq Sample Size Analysis
Version: 1.27.0
Date: 2020-01-21
Author: Zixuan Shao [aut, cre]
Maintainer: Zixuan Shao <Zixuanshao.zach@gmail.com>
Description: The ERSSA package takes user supplied RNA-seq differential expression 
	dataset and calculates the number of differentially expressed genes at varying 
	biological replicate levels. This allows the user to determine, without relying on
	any a priori assumptions, whether sufficient differential detection has been acheived 
	with their RNA-seq dataset.
Depends: R (>= 4.0.0)
Imports: edgeR (>= 3.23.3), DESeq2 (>= 1.21.16), ggplot2 (>= 3.0.0),
        RColorBrewer (>= 1.1-2), plyr (>= 1.8.4), BiocParallel (>=
        1.15.8), apeglm (>= 1.4.2), grDevices, stats, utils
Suggests: BiocStyle, knitr, rmarkdown
VignetteBuilder: knitr
biocViews: ImmunoOncology, GeneExpression, Transcription,
        DifferentialExpression, RNASeq, MultipleComparison,
        QualityControl
License: GPL-3 | file LICENSE
Encoding: UTF-8
LazyData: true
URL: https://github.com/zshao1/ERSSA
RoxygenNote: 7.0.2
git_url: https://git.bioconductor.org/packages/ERSSA
git_branch: devel
git_last_commit: 456b786
git_last_commit_date: 2025-04-15
Repository: Bioconductor 3.22
Date/Publication: 2025-06-04
NeedsCompilation: no
Packaged: 2025-06-04 22:54:28 UTC; biocbuild
Built: R 4.5.0; ; 2025-06-05 12:56:53 UTC; windows
