Package: DEWSeq
Type: Package
Title: Differential Expressed Windows Based on Negative Binomial
        Distribution
Version: 1.23.1
Authors@R: 
    c(person("Sudeep","Sahadevan",email= "sahadeva@embl.de",role="aut"), 
    person("Thomas","Schwarzl",email="schwarzl@embl.de",role="aut"),
    person("bioinformatics team","Hentze",email="biohentze@embl.de",role=c("aut","cre")))
Description: DEWSeq is a sliding window approach for the analysis of
    differentially enriched binding regions eCLIP or iCLIP next generation
    sequencing data.
Imports: BiocGenerics, data.table(>= 1.11.8), Seqinfo, GenomicRanges,
        methods, S4Vectors, SummarizedExperiment, stats, utils
Depends: R(>= 4.0.0), R.utils, DESeq2, BiocParallel
Suggests: knitr, tidyverse, rmarkdown, testthat, BiocStyle, IHW
VignetteBuilder: knitr
biocViews: Sequencing, GeneRegulation, FunctionalGenomics,
        DifferentialExpression
License: LGPL (>= 3)
URL: https://github.com/EMBL-Hentze-group/DEWSeq/
Encoding: UTF-8
LazyData: false
RoxygenNote: 7.1.2
BugReports: https://github.com/EMBL-Hentze-group/DEWSeq/issues
git_url: https://git.bioconductor.org/packages/DEWSeq
git_branch: devel
git_last_commit: eb67ad6
git_last_commit_date: 2025-07-22
Repository: Bioconductor 3.22
Date/Publication: 2025-07-23
NeedsCompilation: no
Packaged: 2025-07-23 22:40:19 UTC; biocbuild
Author: Sudeep Sahadevan [aut],
  Thomas Schwarzl [aut],
  bioinformatics team Hentze [aut, cre]
Maintainer: bioinformatics team Hentze <biohentze@embl.de>
Built: R 4.5.1; ; 2025-07-24 13:00:09 UTC; windows
