Package: BubbleTree
Type: Package
Title: BubbleTree: an intuitive visualization to elucidate tumoral
        aneuploidy and clonality in somatic mosaicism using next
        generation sequencing data
Version: 2.39.0
Date: 2019-10-03
Authors@R: c(
    person("Todd", "Creasy", 
            email = "creasyt@medimmune.com", 
            role = c("aut","ctb")),
    person("Wei", "Zhu", 
            email = "zhuw@medimmune.com", 
            role = c("aut","cre")),
    person("Michael", "Kuziora", 
            email = "kuzioram@medimmune.com", 
            role = c("aut","ctb")),
    person("Brandon", "W.", "Higgs", 
            email = "higgsb@medimmune.com", 
            role = c("aut","ctb"))
    )
Author: Wei Zhu <zhuw@medimmune.com>,
    Michael Kuziora <kuzioram@medimmune.com>,
    Todd Creasy <creasyt@medimmune.com>,
    Brandon Higgs <higgsb@medimmune.com>
Maintainer: Todd Creasy <creasyt@medimmune.com>, Wei Zhu <weizhu365@gmail.com>
Description: CNV analysis in groups of tumor samples.
License: LGPL (>= 3)
Imports: BiocGenerics (>= 0.31.6), BiocStyle, Biobase, ggplot2,
        WriteXLS, gtools, RColorBrewer, limma, grid, gtable, gridExtra,
        biovizBase, e1071, methods, grDevices, stats, utils
Depends: R (>= 3.5), IRanges, GenomicRanges, plyr, dplyr, magrittr
Suggests: knitr, rmarkdown
biocViews: CopyNumberVariation, Software, Sequencing, Coverage
Packaged: 2025-06-04 21:52:42 UTC; biocbuild
VignetteBuilder: knitr
RoxygenNote: 5.0.1
git_url: https://git.bioconductor.org/packages/BubbleTree
git_branch: devel
git_last_commit: c8fc528
git_last_commit_date: 2025-04-15
Repository: Bioconductor 3.22
Date/Publication: 2025-06-04
NeedsCompilation: no
Built: R 4.5.0; ; 2025-06-05 12:35:26 UTC; windows
