# Code for using BridgeDb identifier mapping framework from within R

## Documentation for package ‘BridgeDbR’ version 2.19.3

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

BridgeDbR-package | BridgeDbR Package.
BridgeDbR | BridgeDbR Package.
fullNameExists | Determines if the full name corresponds to any known data source.
getAttributes | Returns the attributes of the given identifier.
getBridgeNames | Method to list the BridgeDb identifier mapping file names as available from the download site.
getDatabase | Downloads a identifier mapping database for the given organism.
getDataSource | Return a DataSource object based on either a name, Bioregistry.io prefix, or system code.
getFullName | Return the name of a particular data source.
getMatchingSources | Return a list of data sources of which the identifier pattern matches the identifier given.
getOrganismCode | Return the code of a particular organism.
getProperties | BridgeDb database properties.
getSystemCode | Return the system code of a particular data source.
loadDatabase | Loads a BridgeDb identifier mapping database (.bridge file) as an IDMapper Java-Object.
map | Converts one identifier into other identifiers for the given target data source.
maps | Converts multiple identifiers into other identifiers for the given target data source.
registerDataSource | Registers a new DataSource based on the given name or system code.
systemCodeExists | Determines if the system code corresponds to any known data source.
xrefExists | Checks if the given identifier exists