# Generated by roxygen2: do not edit by hand

export(aggregateSignal)
export(aggregateSignalGRList)
export(convertToFromNullDist)
export(getGammaPVal)
export(getMetaRegionProfile)
export(getPermStat)
export(getTopRegions)
export(plotAnnoScoreDist)
export(regionQuantileByTargetVar)
export(rsRankingIndex)
export(rsScoreHeatmap)
export(runCOCOA)
export(runCOCOAPerm)
export(signalAlongAxis)
import(BiocGenerics)
import(GenomicRanges)
import(IRanges)
import(S4Vectors)
import(simpleCache)
importFrom(Biobase,sampleNames)
importFrom(ComplexHeatmap,Heatmap)
importFrom(ComplexHeatmap,draw)
importFrom(MIRA,binRegion)
importFrom(data.table,":=")
importFrom(data.table,as.data.table)
importFrom(data.table,copy)
importFrom(data.table,data.table)
importFrom(data.table,fread)
importFrom(data.table,is.data.table)
importFrom(data.table,rbindlist)
importFrom(data.table,setDT)
importFrom(data.table,setattr)
importFrom(data.table,setcolorder)
importFrom(data.table,setkey)
importFrom(data.table,setnames)
importFrom(data.table,setorder)
importFrom(data.table,setorderv)
importFrom(fitdistrplus,fitdist)
importFrom(ggplot2,aes)
importFrom(ggplot2,element_line)
importFrom(ggplot2,element_text)
importFrom(ggplot2,facet_wrap)
importFrom(ggplot2,geom_boxplot)
importFrom(ggplot2,geom_hline)
importFrom(ggplot2,geom_jitter)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,scale_color_brewer)
importFrom(ggplot2,scale_color_discrete)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_fill_brewer)
importFrom(ggplot2,scale_x_discrete)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_classic)
importFrom(ggplot2,xlab)
importFrom(ggplot2,ylab)
importFrom(ggplot2,ylim)
importFrom(grDevices,dev.off)
importFrom(grid,grid.draw)
importFrom(grid,grid.grabExpr)
importFrom(grid,grid.newpage)
importFrom(grid,popViewport)
importFrom(grid,pushViewport)
importFrom(grid,unit)
importFrom(grid,viewport)
importFrom(methods,hasArg)
importFrom(methods,is)
importFrom(simpleCache,simpleCache)
importFrom(stats,coefficients)
importFrom(stats,ecdf)
importFrom(stats,lm)
importFrom(stats,p.adjust)
importFrom(stats,pgamma)
importFrom(stats,poly)
importFrom(stats,wilcox.test)
importFrom(tidyr,gather)
