Package: fission
Title: RangedSummarizedExperiment for time course RNA-Seq of fission
        yeast in response to stress, by Leong et al., Nat Commun 2014.
Version: 1.31.0
Author: Michael Love
Maintainer: Michael Love <michaelisaiahlove@gmail.com>
Description: This package provides a RangedSummarizedExperiment object of
        read counts in genes for a time course RNA-Seq experiment of
        fission yeast (Schizosaccharomyces pombe) in response to
        oxidative stress (1M sorbitol treatment) at 0, 15, 30, 60, 120
        and 180 mins. The samples are further divided between a
        wild-type group and a group with deletion of atf21. The read
        count matrix was prepared and provided by the author of the
        study: Leong HS, Dawson K, Wirth C, Li Y, Connolly Y, Smith DL,
        Wilkinson CR, Miller CJ. "A global non-coding RNA system
        modulates fission yeast protein levels in response to stress".
        Nat Commun 2014 May 23;5:3947. PMID: 24853205. GEO: GSE56761.
biocViews: ExperimentData, Genome, Saccharomyces_cerevisiae_Data,
        SequencingData, RNASeqData, GEO
License: LGPL
Depends: R (>= 2.10), SummarizedExperiment
Suggests: knitr, markdown
VignetteBuilder: knitr
git_url: https://git.bioconductor.org/packages/fission
git_branch: devel
git_last_commit: 475d7c5
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
Date/Publication: 2025-11-04
NeedsCompilation: no
Packaged: 2025-11-04 16:19:28 UTC; biocbuild
