Package: scRNAseqApp
Title: A single-cell RNAseq Shiny app-package
Version: 1.11.0
Authors@R: 
    c(person(given = "Jianhong",
             family = "Ou",
             role = c("aut", "cre"),
             email = "jou@morgridge.org",
             comment=c(ORCID="0000-0002-8652-2488")))
Description: The scRNAseqApp is a Shiny app package designed for interactive 
    visualization of single-cell data. It is an enhanced version derived from 
    the ShinyCell, repackaged to accommodate multiple datasets.
    The app enables users to visualize data containing various types of 
    information simultaneously, facilitating comprehensive analysis.
    Additionally, it includes a user management system to regulate database
    accessibility for different users.
License: GPL-3
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
VignetteBuilder: knitr
biocViews: Visualization, SingleCell, RNASeq
Depends: R (>= 4.3.0)
Imports: bibtex, bslib, circlize, ComplexHeatmap, colourpicker,
        data.table, DBI, DT, fs, GenomicRanges, GenomeInfoDb, ggdendro,
        ggforce, ggplot2, ggrepel, ggridges, grDevices, grid,
        gridExtra, htmltools, IRanges, jsonlite, Matrix, magrittr,
        methods, patchwork, plotly, RColorBrewer, RefManageR, reshape2,
        rhdf5, Rsamtools, RSQLite, rtracklayer, S4Vectors, scales,
        scrypt, Seurat, SeuratObject, shiny, shinyhelper, shinymanager,
        slingshot, SingleCellExperiment, sortable, stats, tools, xfun,
        xml2, utils
Suggests: rmarkdown, knitr, testthat, BiocStyle, shinytest2
Enhances: celldex, future, SingleR, SummarizedExperiment, tricycle
URL: https://github.com/jianhong/scRNAseqApp
BugReports: https://github.com/jianhong/scRNAseqApp/issues
git_url: https://git.bioconductor.org/packages/scRNAseqApp
git_branch: devel
git_last_commit: 781d06f
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
Date/Publication: 2025-11-04
NeedsCompilation: no
Packaged: 2025-11-05 00:53:14 UTC; biocbuild
Author: Jianhong Ou [aut, cre] (ORCID: <https://orcid.org/0000-0002-8652-2488>)
Maintainer: Jianhong Ou <jou@morgridge.org>
