Changes in version 0.99.0
-------------------------

- This package implements various functions to find 
template strand changepoints in Strand-seq data.

Changes in version 1.1.2
-------------------------

- Fixed bug in hotspotter function
- Improved handling of small chromosomes/contigs
- Fixed bug in masking certain genomic regions (maskRegions param)
- Improved handling of double SCE chromosomes when synchronizing read directionality across cells

Changes in version 1.2.1
-------------------------

- Added new genotyping method based on binomial probabilities
  see parameter genoT = 'fisher' or 'binom'; default: 'fisher'

Changes in version 1.7.1
-------------------------

- Added new deltaW calculator that allows to define multiplication of the original window size to
use for deltaW calculations. One can invoke this by setting 'multi.sizes' parameter.

Changes in version 1.7.2
-------------------------

- Added new function to allow for removal of spikes in read coverage present in composite files.
