Package: TENxIO
Type: Package
Title: Import methods for 10X Genomics files
Version: 1.13.0
Authors@R: 
  person(
    "Marcel", "Ramos", , "marcel.ramos@sph.cuny.edu",
    c("aut", "cre"), c(ORCID = "0000-0002-3242-0582")
  )
Depends: R (>= 4.5.0), SingleCellExperiment, SummarizedExperiment
Imports: BiocBaseUtils, BiocGenerics, BiocIO, Seqinfo, GenomicRanges,
        HDF5Array, Matrix, MatrixGenerics, methods, RCurl, readr,
        rhdf5, R.utils, S4Vectors, utils
Suggests: BiocStyle, DropletTestFiles, ExperimentHub, knitr,
        RaggedExperiment (>= 1.33.3), rmarkdown, Rsamtools, tinytest
Description: Provides a structured S4 approach to importing data files from
  the 10X pipelines. It mainly supports Single Cell Multiome ATAC + Gene
  Expression data among other data types. The main Bioconductor data
  representations used are SingleCellExperiment and RaggedExperiment.
biocViews: Software, Infrastructure, DataImport, SingleCell
VignetteBuilder: knitr
License: Artistic-2.0
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
BugReports: https://github.com/waldronlab/TENxIO/issues
URL: https://github.com/waldronlab/TENxIO
Collate: 'TENxFile-class.R' 'TENxFileList-class.R'
        'TENxFragments-class.R' 'TENxH5-class.R' 'TENxIO-package.R'
        'TENxMTX-class.R' 'TENxPeaks-class.R' 'TENxTSV-class.R'
        'utils.R'
Date: 2025-05-06
git_url: https://git.bioconductor.org/packages/TENxIO
git_branch: devel
git_last_commit: e1cb3c4
git_last_commit_date: 2025-10-29
Repository: Bioconductor 3.23
Date/Publication: 2025-11-03
NeedsCompilation: no
Packaged: 2025-11-04 01:19:51 UTC; biocbuild
Author: Marcel Ramos [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-3242-0582>)
Maintainer: Marcel Ramos <marcel.ramos@sph.cuny.edu>
