R: Check a gene signature's prognostic performance against random signatures, known signatures, and permuted data/metadata

# Check a gene signature's prognostic performance against random signatures, known signatures, and permuted data/metadata

## Documentation for package ‘SigCheck’ version 2.43.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

SigCheck-package | Check a gene signature's survival and/or classification performance against random signatures, known signatures, and permuted data/metadata.
classifyResults | Precomputed list of results for a calls to 'sigCheckRandom' and 'sigCheckKnown' using the 'breastCancerNKI' dataset.
knownSignatures | Previously identified gene signatures for use in 'sigCheckKnown'
nkiResults | Precomputed list of results for a call to 'sigCheckAll' using the 'breastCancerNKI' dataset.
resultsNKI | Previously identified gene signatures for use in 'sigCheckKnown'
SigCheck | Check a gene signature's survival and/or classification performance against random signatures, known signatures, and permuted data/metadata.
sigCheck | Create a 'SigCheckObject' and establish baseline performance.
sigCheckAll | Run a default set of checks on a gene signature.
sigCheckKnown | Check signature performance against a panel of known signatures.
SigCheckObject | Class '"SigCheckObject"'
SigCheckObject-class | Class '"SigCheckObject"'
sigCheckPermuted | Check signature performance against performance on randomly permuted data.
sigCheckPlot | Plot results of a signature check or set of checks
sigCheckRandom | Check signature performance against signatures composed of randomly selected features