Package: curatedCRCData
Type: Package
Title: Colorectal Cancer Gene Expression Analysis
Version: 2.45.6
Date: 2026-10-03
Authors@R: c(
    person("Princy", "Parsana", role = "aut"),
    person("Markus", "Riester", role = "aut"),
    person("Curtis", "Huttenhower", role = "aut"),
    person("Levi", "Waldron", email = "lwaldron.research@gmail.com", role = c("aut", "cre"), comment = c(ORCID = "0000-0003-2725-0694")),
    person("National Cancer Institute", role = "fnd", comment = "5U24CA180996")
  )
Description: Manually curated human colorectal cancer ExpressionSet objects
    from 34 studies, with uniformly processed expression data and
    standardized clinical metadata including survival outcomes. Datasets
    are hosted on Zenodo and downloaded on first use, then cached locally
    with BiocFileCache. Includes a configurable script for rule-based
    creation of filtered dataset lists for meta-analysis.
Depends: R (>= 4.6.0), Biobase
Imports: BiocFileCache, tools, utils
Suggests: survival, testthat (>= 3.0.0), metafor, genefilter, logging,
        sva, xtable, futile.logger, BiocStyle, knitr, rmarkdown
VignetteBuilder: knitr
License: Artistic-2.0
biocViews: ExperimentData, ExpressionData, CancerData, ColonCancerData,
        MicroarrayData, RNASeqData, GEO
URL: https://github.com/waldronlab/curatedCRCData
BugReports: https://github.com/waldronlab/curatedCRCData/issues
BuildResaveData: no
Config/testthat/edition: 3
git_url: https://git.bioconductor.org/packages/curatedCRCData
git_branch: devel
git_last_commit: b01815b
git_last_commit_date: 2026-10-06
Repository: Bioconductor 3.24
Date/Publication: 2026-10-08
NeedsCompilation: no
Packaged: 2026-10-08 15:10:33 UTC; biocbuild
Author: Princy Parsana [aut],
  Markus Riester [aut],
  Curtis Huttenhower [aut],
  Levi Waldron [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-2725-0694>),
  National Cancer Institute [fnd] (5U24CA180996)
Maintainer: Levi Waldron <lwaldron.research@gmail.com>
