f4c2212792e28fc5dd125444b49aa419 *DESCRIPTION
d46c237bdb2d76c2fa402c159aa31cde *LICENSE
86b8fa331533f28f57453cac8bb7a22a *NAMESPACE
86b2087730ace10cba7a3d28d33e051a *NEWS
b382760f5a9000fcadd37aecae7935aa *R/fit.R
7a87c78903a438d308dd62b1a824cff1 *R/maaslin3.R
ed5868c49d9733543195dd9979c61e5c *R/maaslin_logging.R
401dd6c44915baa734149b8583207082 *R/utility_scripts.R
a7840ff75f710b209c31ff3812019a9d *R/viz.R
c13b7a5aab6afdb6f81310cf7d18ac04 *README.md
5313549a60533192629c5495a7fe71d5 *build/vignette.rds
9f45a7e9e6f7a5f9705f83434a7997ac *inst/doc/maaslin3_manual.R
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338c74d5a0d9bb880ccd3a3cdb476bfc *inst/doc/maaslin3_tutorial.R
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1d81ebad1f5a6baac0c2a8072881519f *inst/extdata/HMP2_metadata.tsv
f12221840c0a583a34f666b88ba2a9bf *inst/extdata/HMP2_taxonomy.tsv
3c8b287550011aac0905663aa1333fea *inst/extdata/abundance_spike_in_ex.tsv
bb79f2a60e95075b403f381b3e41ad26 *inst/extdata/abundance_total_ex.tsv
1015768a737924a005f24ec786fac8d0 *inst/extdata/metadata_spike_in_ex.tsv
fed1712e82ba0b73d06c42bd1ff65b08 *inst/extdata/metadata_total_ex.tsv
7fabbc8e9abb47c5aa9d37cdcd3a2d20 *inst/extdata/scaling_factors_spike_in_ex.tsv
202e13e0ee4371ed1cc180e4b13cca4b *inst/extdata/scaling_factors_total_ex.tsv
1869fe75e3ec87f92c73229298e028ef *inst/script/data_generation.md
4a49b51dbbe09b0294224bb1ded581d8 *man/maaslin3.Rd
47744291ea60be31875539909b0b7caa *man/maaslin_check_arguments.Rd
2396d4013640c7f3564cafabc13ee2c3 *man/maaslin_check_formula.Rd
0cf855dfb8df7ed5681e5f8d0f6a2bcd *man/maaslin_compute_formula.Rd
385f4109f3aacf37ef00af6913353417 *man/maaslin_contrast_test.Rd
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5a2bbd178897ab8d93030272ae654f61 *man/maaslin_fit.Rd
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896e2cc1984df6dac115847f36518992 *man/maaslin_log_reset.Rd
6f8a08f52e1c6beafe2090946236cc4c *man/maaslin_normalize.Rd
97d9e8f860e8fb7200a0e3230572cba5 *man/maaslin_plot_results.Rd
1ffc5804086de9133a0fadee09ecdf63 *man/maaslin_plot_results_from_output.Rd
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17f67745c1a43654b48c8e2ee18861f2 *man/maaslin_read_data.Rd
aa815fd1abf64567f3b0c715fe5f4d13 *man/maaslin_reorder_data.Rd
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4bc9337ee527ec0ba8ec23175300cb8d *man/maaslin_write_results.Rd
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dbe6125314cc81528e2c1bd975639a56 *man/preprocess_taxa_mtx.Rd
51e191f759b6150388ad8f2b02c8e02c *tests/testthat.R
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a3c06838a0ac1d828b2fdca7e43f778f *tests/testthat/test_maaslin_plot_results_from_output.R
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9f5c1487fd9a967fd158f0d7e573afbf *tests/testthat/test_maaslin_read_data.R
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519e50c38d07cb669f1b6a3bc39ad013 *tests/testthat/test_maaslin_transform.R
d0857b06ceed78b80429448b89bd3535 *tests/testthat/test_maaslin_write_results.R
f8902e9ac43d5a66118f8eb9cb44f152 *tests/testthat/test_namespace_imports.R
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8933d552683704da20bfaf3f3b9a0351 *tests/testthat/test_no_self_triple_colon.R
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0a66a946dd31303693631f1ac3bb1204 *tests/testthat/test_parallelization.R
36cbdd6b74838864b35ccb4be1564daf *tests/testthat/test_plot_shape_circles.R
557f38a5b94b29119c83ba5d228ec8d8 *tests/testthat/test_preprocess_dna_mtx.R
1af93d2969a1a225c00f7875390ec3dd *tests/testthat/test_preprocess_taxa_mtx.R
0292f970252a182ba26dd2a97b0b59ba *tests/testthat/test_scoped_optimizers.R
5c259db3a22dd914bcade1981a7e17fe *vignettes/maaslin3_manual.Rmd
d6bedb57a19353c42e999adce4304ed3 *vignettes/maaslin3_tutorial.Rmd
