effc2ba0a3805b48a8d2d1d79dcafe79 *DESCRIPTION
86d3f3a95c324c9479bd8986968f4327 *LICENSE
1de1ad34a8055a25d294242b3099730b *NAMESPACE
d2dd3440d3cd98308c867e08e802ff10 *NEWS.md
5e53cc30f169968518d1734c4e3fd753 *R/dnaEPICO-package.R
27eecda3c2d78684a706263599e0f8bd *R/dnamReport.R
84de763d15a1ef2ef1cfd1a2a0c78d72 *R/estimateLC.R
980aa552d6ad3b0527d2fa8528b15459 *R/estimateLCMinfiEwasWater.R
7a2fd1d25e3246a17d1e7b2b279491e5 *R/example_helpers.R
64095b98f92b65a23f88d9f388753eb8 *R/extractMake.R
5eb89c5f292828b8d853ed13d9ea42da *R/globals.R
a0e37a51bd3974683701c4b971a6edb2 *R/methylationGLMM_T1T2.R
1c29183d14ea5de9f1d1c67ade3d4eb9 *R/methylationGLMM_T1T2_steps.R
961327b58007dc439af6753042ab8c04 *R/methylationGLM_T1.R
012a0035678fee27b2cafcc53ff2d981 *R/methylationGLM_T1_steps.R
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7ee614336196dd174126b5edae9b2d27 *R/preprocessingMinfiEwasWater_utils.R
dbd63ce0426767d6ccf5c7e4f3aa89d0 *R/preprocessingPheno.R
c0f929ee5c31cf5e034a7d291122db9a *R/preprocessingPheno_steps.R
891e15d46897811d33fbc8d5dc26f69e *R/readPhenotypeTargets.R
e1c408d5aaa44c1c50268efc94e27d6a *R/result_classes.R
861187b0be9907b65127674f67a03c27 *R/svaEnmix.R
28dada5b3a8c2ca4d7e84a5ca7744dc0 *R/svaEnmix_steps.R
89b7674e00442c43d72bbfcdca21fd89 *README.md
f04e68b7f960e5b2f29f30d521308b2d *build/vignette.rds
89bffa045766d35cb66c2612b7da5089 *inst/CITATION
696afcc830530eb998984bb94b9309f0 *inst/doc/dnaEPICO-local.R
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259f52ebff55be59680f4557f0f5f314 *inst/extdata/dnaEPICO.svg
88252c958a958c0aaabd6e314e5764a3 *inst/extdata/make/Makefile.model.pipeline
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87a8efd35da9f7973915c711e9c54434 *inst/extdata/salivaEPIC.txt
4b0beb12b846ebc174f01326b65e1bc2 *inst/scripts/data.R
cd67e57fcfdffa2a4034ff7db3e12080 *man/analyzeSvaEnmix.Rd
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6d657e9d10d8b75fe4a86d89de27b92a *man/buildRawMinfiEwasWater.Rd
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d88b7ca5ad0a2bd7f7e1e0abc8d36633 *man/dnaEPICO.Rd
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380a29ea2ce23f792e9824e4b359fc86 *man/dnaEPICO_dnamReport_render-class.Rd
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4f9fbfead7b13413c3a5f0edb2f8f241 *man/dnaEPICO_preprocessingPheno-class.Rd
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f6cab4bb5d9e0604c86d63cd1c62c1e7 *man/dnamReport.Rd
3a6d115c9e3e893974f495320dbeb938 *man/estimateLC.Rd
462cbb6a505fced8862ac76f39dbbbc9 *man/estimateLCMinfiEwasWater.Rd
8c684993fde25366bb08af7992156adb *man/estimateSvaEnmixControls.Rd
e5c1a5d50966d2ac3aee05f337914bfe *man/extractMake.Rd
075abc7eb9e23dd3267a7b9515818b24 *man/extractMetricsMinfiEwasWater.Rd
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56ba90ca73fa750de8a7d760d1f216eb *man/plotRawDensityMinfiEwasWater.Rd
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0af7dead4f2e9d7d65338627b414b4cb *man/predictSexMinfiEwasWater.Rd
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2960a17d682d3a69763f2f4457918e90 *man/preprocessingPheno.Rd
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261a15bdc159e7056b0a261bb167884e *man/readPhenotypeTargets.Rd
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3de0071f65bee92646bffcb84e32a659 *man/renderDnamReport.Rd
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0be9d73aa1722c3b9297caad23175eb3 *tests/testthat.R
27eff5b76cc0a6ff7c2634e3c1cf2fcf *tests/testthat/test-dnaEPICO_test.R
38d97b4d3d339fe6637fae285b72dcdb *tests/testthat/test-dnamReport.R
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c6609e43c3493a1eb609740b685c6013 *tests/testthat/test-svaEnmix.R
0400e73c135e6b198c7c633a0ac47154 *vignettes/dnaEPICO-local.Rmd
e071f81b9c92fe8d02e358587a42b5ed *vignettes/dnaEPICO-pipeline.Rmd
938aa917f21569abd930fc43b80c40f1 *vignettes/dnaEPICO.bib
