26dba2788179fd55822da0c1403b5372 *DESCRIPTION
550f86d3ee2113afcbafb6add9e84571 *LICENSE
65e6eb724b7779f9526fe85e16208e65 *NAMESPACE
f41eea0f8662c10540372b3adcb8e621 *NEWS.md
de4e1fed99bfc4e56d10b8db2517ab00 *R/AllClasses.R
c6c9b45dbf57e584c2a07d3ae87c59c6 *R/AllGenerics.R
14dda4042857a491eca250348b015a46 *R/coercion.R
22440c5b201359a3724d3c353fbd686b *R/compute.R
5a31c071ee68529fe5ea64b94b47deda *R/constructors.R
472dbe6f86d87984c508f030adb053c8 *R/dbSequence-package.R
9b9d0251193da0480b7bb3f7872b0f8b *R/import.R
9f2982e889f2123fc0a7ca68b549926f *R/plyranges-compat.R
4f43b8e1b60b156fd3291a745209af8d *R/plyranges-overlaps.R
03ca9e48b994f9c8aef8207f22e6b197 *R/pool.R
6326f9a8cc9f193fb681ea18ec094a06 *R/utilities.R
2a4e2dcaa1d6e21aff0cf9b50486d2d5 *R/validation.R
1a5df96e7380a3aca98a7e8853a062ec *R/zzz.R
23fe64e9949ddea168c651a8a69a8832 *README.md
acdb612d61dea3ea65447803b1d9be78 *build/vignette.rds
16d298568ba9eee868f0ad12623937fe *inst/CITATION
19c9b4307e4eb0cc4dba0579bc5acbff *inst/doc/data-ingestion.R
e9338c88cccd8d2f6cd6472148604b56 *inst/doc/data-ingestion.Rmd
2f1b5d3fd8e4f5dbdc339332f19fd579 *inst/doc/data-ingestion.html
4a5ffd91a9239f9672d17acda6b30808 *inst/doc/plyranges-api.R
b918f0a635714f8277b50637b6dd6fd6 *inst/doc/plyranges-api.Rmd
9e9a66f4d2c8e5dc1352370c387d9126 *inst/doc/plyranges-api.html
0d97df8d6b8887f7b7324fb08c91b243 *inst/extdata/README.md
09f3b100ec0d6df19a98a129215496b8 *inst/extdata/example.bam
9480a842d367a4c975c1d0c1c983e135 *inst/extdata/example.bam.bai
31ecad3e1298786de5ccddf9d28fcfab *inst/extdata/example.bed
45b59ff980dff0a7ff2543a93f8cda90 *inst/extdata/example.fasta
13eb2dd1f1b4a180ad30f570c9e7f4a3 *inst/extdata/example.fastq
3ea484aeeb49b769426828caea75fb6e *inst/extdata/example.gff3
b5fe73fc5277389793a26b1ce8783b65 *inst/extdata/example.sam
8b925bbda0d7e9028376ef5cdc8920ef *inst/extdata/example.vcf
09ff46767ba24762e7be887849445b21 *man/DuckDBFile-class.Rd
1cb77568f38327ff5a56a754cf64b408 *man/DuckDBFile.Rd
b6a705efb4646cd92d43d59112952adf *man/asRanges.Rd
d3e1d1349aef531d74e5da023349993c *man/as_granges.Rd
cae5a2d35ecd0ea82bc6c01278464475 *man/as_ranges-dbSequence-method.Rd
f507e90980d2f0d704cb326679f480f8 *man/coerce-methods.Rd
713e7d6c610dc1d094101edc98f701d0 *man/compute.dbSequence.Rd
3685e9c25bc235ba92d880acf8640c09 *man/compute_coverage.Rd
e59842b4174721e0902a52d03a9d22d8 *man/dbSequence-class.Rd
dc97813dbf4e7a0445628b9f42e6230f *man/dbSequence-package.Rd
14a388635adf018a778a26c622d1270f *man/dbSequence.Rd
d2f2ef5fe9aa6226f6e747fcff9dd7d4 *man/fileSource.Rd
42bd869ba1331030c661a184aabf8cec *man/filter_by_overlaps.Rd
36ebf30de98ce12f8e4708feb11a2f74 *man/import-BEDFile-missing-ANY-method.Rd
dd6220b321d18199e19bbd90d162d0a9 *man/import-BamFile-missing-ANY-method.Rd
693c90b14c4791f68cde4a214429a007 *man/import-FastaFile-missing-ANY-method.Rd
082b1bf6f8cdea47828ada4e4b45aa3b *man/import-GFFFile-missing-ANY-method.Rd
4353f415724334576976fd4f39996f4d *man/import-GTFFile-missing-ANY-method.Rd
5d6527fded33349c421a04208f6e0efa *man/import-VcfFile-missing-ANY-method.Rd
b654cbf6cbdd9fcfac8e2c3b13d98121 *man/import-character-missing-ANY-method.Rd
02943245fae8732ef1538a04bb871e6e *man/pool.Rd
f69b899ec421be9f4716b448bb2aa311 *man/read_bam.Rd
e0eef6ff0c040d32c616e50d202f5bfe *man/read_bed.Rd
4c0c515feb651c8fcd0b7d042f3ee276 *man/read_gff.Rd
245b749ff164f5e66b9bbcc39dd4fbdc *man/read_vcf.Rd
a9111ce77bc4ccf2158f73ed2445f906 *man/show-DuckDBFile-method.Rd
67a97d19d43cd873dd251e0a3f57cd9b *man/show-dbSequence-method.Rd
7a63c56b341a5636248ea7154238fe8a *man/tableName.Rd
ceed642bb334b3549da0b5206ddcada7 *tests/testthat.R
a97204bdbfd4545a5df7c945c55ebc7a *tests/testthat/test-argument-validation.R
38e3546022e167cc859ba972bf390515 *tests/testthat/test-benchmarks.R
8e64e74284c47b09924bfbc6c5be5d15 *tests/testthat/test-classes.R
2560be25e164dd92ea0aa16e8e67e9b4 *tests/testthat/test-coercion.R
88b867b36cd1434e9f03bca9d6e80def *tests/testthat/test-import.R
45d26bd53182295b03c1aec9e0fa9117 *tests/testthat/test-plyranges-compat.R
d5a7fac4a626ac030a9d71ad602ed1d9 *tests/testthat/test-range-operations.R
8903cea1031eccef494d5bda4cef8385 *tests/testthat/test-utilities.R
ad0a60ed53745f20577b3a64af75a2c2 *tests/testthat/test.duckdb
e9338c88cccd8d2f6cd6472148604b56 *vignettes/data-ingestion.Rmd
b918f0a635714f8277b50637b6dd6fd6 *vignettes/plyranges-api.Rmd
