Package: SimiCviz
Type: Package
Title: Visualization Tools for Gene Regulatory Network Analysis
Version: 0.99.2
Authors@R: 
    person(given = "Irene",
           family = "Marín-Goñi",
           role = c("aut", "cre"),
           email = "imarin.4@alumni.unav.es",
           comment=c(ORCID="0000-0002-5060-0712"))
Description: 
    Visualization and export utilities for SimiC and SimiCPipeline outputs.
    The package focuses on importing SimiC-style results (e.g., weights, AUC
    metrics) from pickle/CSV files, processing and generating publication-ready
    plots (networks, heatmaps, distributions) and tables saved into a reproducible, 
    ordered directory hierarchy.
License: MIT + file LICENSE
Encoding: UTF-8
SystemRequirements: Python (>= 3.8)
Depends: R (>= 4.6)
Imports: methods, stats, BiocParallel, viridisLite, utils, Matrix,
        graphics, SummarizedExperiment, colorspace, gridExtra, ggplot2,
        dplyr, tibble, tidyr, reshape2, scales, reticulate (>= 1.45.0)
Suggests: knitr, rmarkdown, BiocStyle, testthat (>= 3.0.0)
VignetteBuilder: knitr
URL: https://github.com/ML4BM-Lab/SimiCviz
BugReports: https://github.com/ML4BM-Lab/SimiCviz/issues
biocViews: Software, Visualization, GeneRegulation, NetworkInference,
        Network, SingleCell
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
git_url: https://git.bioconductor.org/packages/SimiCviz
git_branch: devel
git_last_commit: ba290d2
git_last_commit_date: 2026-07-04
Repository: Bioconductor 3.24
Date/Publication: 2026-08-03
NeedsCompilation: no
Packaged: 2026-08-04 00:20:33 UTC; biocbuild
Author: Irene Marín-Goñi [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-5060-0712>)
Maintainer: Irene Marín-Goñi <imarin.4@alumni.unav.es>
