Package: MsStash
Title: Infrastructure to serialize and restore mass spectrometry data
        objects
Version: 0.99.0
Authors@R: 
    c(person(given = "Johannes", family = "Rainer",
             email = "Johannes.Rainer@eurac.edu",
             role = c("aut", "cre"),
             comment = c(ORCID = "0000-0002-6977-7147")),
      person(given = "Philippine", family = "Louail",
             email = "philippine.louail@eurac.edu",
	     role = "aut",
	     comment = c(ORCID = "0009-0007-5429-6846")),
      person(given = "Laurent", family = "Gatto",
             email = "laurent.gatto@uclouvain.be",
	     role = "ctb",
	     comment = c(ORCID = "0000-0002-1520-2268")))
Description: The serialization mechanism of R allows to save and load R data
             objects in a binary format, that can however not be read by other
	     programming languages or software. The MsStash package defines
	     classes and method to enable serializing and restoring, or
	     importing, mass spectrometry data objects to and from language
	     agnostic file formats. A variety of different file types,
	     including HDF5 and JSON-based formats defined by the Bioconductor
	     *alabaster* package are supported. The file type can be defined
	     and configured through a second argument `param` of the save/read
	     methods. Additional packages extending MsStash provide the
	     implementations to serialize/restore MS data objects.
Depends: R (>= 4.6.0)
Imports: methods, ProtGenerics
Suggests: BiocStyle, rmarkdown, knitr, alabaster.base, fs, testthat
License: GPL-3
Encoding: UTF-8
VignetteBuilder: knitr
BugReports: https://github.com/RforMassSpectrometry/MsStash/issues
URL: https://github.com/RforMassSpectrometry/MsStash
biocViews: Infrastructure, MassSpectrometry, Metabolomics, DataImport,
        Proteomics
Roxygen: list(markdown=TRUE)
Collate: 'PlainTextParam.R' 'AlabasterParam.R' 'AllGenerics.R'
Config/roxygen2/version: 8.0.0
git_url: https://git.bioconductor.org/packages/MsStash
git_branch: devel
git_last_commit: 2efce24
git_last_commit_date: 2026-06-23
Repository: Bioconductor 3.24
Date/Publication: 2026-07-10
NeedsCompilation: no
Packaged: 2026-07-11 00:00:05 UTC; biocbuild
Author: Johannes Rainer [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-6977-7147>),
  Philippine Louail [aut] (ORCID:
    <https://orcid.org/0009-0007-5429-6846>),
  Laurent Gatto [ctb] (ORCID: <https://orcid.org/0000-0002-1520-2268>)
Maintainer: Johannes Rainer <Johannes.Rainer@eurac.edu>
