# Generated by roxygen2: do not edit by hand

export("runData<-")
export(MsBackendParquet)
export(addMzPeakArchives)
export(buildProjection)
export(createMsBackendParquetDataset)
export(createMzPeakDataset)
export(dropProjection)
export(filterContainsMz)
export(filterSampleData)
export(invalidateDatasetCache)
export(manifestRuns)
export(mzMLToParquet)
export(mzstackCondition)
export(mzstackError)
export(newManifest)
export(readManifest)
export(runData)
export(runVariables)
export(writeManifest)
exportClasses(MsBackendParquet)
exportMethods("$<-")
exportMethods("[")
exportMethods("intensity<-")
exportMethods("mz<-")
exportMethods("spectraNames<-")
exportMethods(backendInitialize)
exportMethods(backendMerge)
exportMethods(centroided)
exportMethods(dataStorage)
exportMethods(extractByIndex)
exportMethods(filterDataOrigin)
exportMethods(filterMsLevel)
exportMethods(filterPrecursorMzRange)
exportMethods(filterPrecursorMzValues)
exportMethods(filterRt)
exportMethods(intensity)
exportMethods(mz)
exportMethods(peaksData)
exportMethods(peaksVariables)
exportMethods(precScanNum)
exportMethods(reset)
exportMethods(show)
exportMethods(smoothed)
exportMethods(spectraData)
exportMethods(spectraNames)
exportMethods(supportsSetBackend)
exportMethods(tic)
exportMethods(uniqueMsLevels)
importClassesFrom(BiocParallel,MulticoreParam)
importClassesFrom(S4Vectors,DataFrame)
importClassesFrom(Spectra,MsBackendCached)
importFrom(BiocParallel,
  SerialParam,
  bpparam,
  bpworkers
)
importFrom(IRanges,NumericList)
importFrom(MsCoreUtils,
  i2index,
  ppm,
  rbindFill,
  vapply1d,
  vapply1l
)
importFrom(S4Vectors,make_zero_col_DFrame)
importFrom(Spectra,
  MsBackendMzR,
  Spectra,
  coreSpectraVariables,
  intensity,
  peaksData,
  processingChunkFactor,
  spectraData,
  spectraVariables
)
importFrom(arrow,
  FileOutputStream,
  ParquetFileWriter,
  ParquetWriterProperties,
  as_arrow_table,
  write_dataset,
  write_parquet
)
importFrom(duckdb,
  duckdb,
  duckdb_register,
  duckdb_unregister
)
importFrom(methods,
  "slot<-",
  as,
  callNextMethod,
  getMethod,
  is,
  new,
  validObject
)
importFrom(tools,
  file_ext,
  file_path_sans_ext
)
importMethodsFrom(DBI,dbConnect)
importMethodsFrom(DBI,dbExecute)
importMethodsFrom(DBI,dbGetQuery)
importMethodsFrom(DBI,dbIsValid)
importMethodsFrom(DBI,dbQuoteIdentifier)
importMethodsFrom(DBI,dbQuoteString)
importMethodsFrom(ProtGenerics,"intensity<-")
importMethodsFrom(ProtGenerics,"mz<-")
importMethodsFrom(ProtGenerics,"spectraNames<-")
importMethodsFrom(ProtGenerics,backendInitialize)
importMethodsFrom(ProtGenerics,backendMerge)
importMethodsFrom(ProtGenerics,centroided)
importMethodsFrom(ProtGenerics,dataOrigin)
importMethodsFrom(ProtGenerics,dataStorage)
importMethodsFrom(ProtGenerics,extractByIndex)
importMethodsFrom(ProtGenerics,filterDataOrigin)
importMethodsFrom(ProtGenerics,filterMsLevel)
importMethodsFrom(ProtGenerics,filterPrecursorMzRange)
importMethodsFrom(ProtGenerics,filterPrecursorMzValues)
importMethodsFrom(ProtGenerics,filterRt)
importMethodsFrom(ProtGenerics,intensity)
importMethodsFrom(ProtGenerics,msLevel)
importMethodsFrom(ProtGenerics,mz)
importMethodsFrom(ProtGenerics,peaks)
importMethodsFrom(ProtGenerics,peaksData)
importMethodsFrom(ProtGenerics,peaksVariables)
importMethodsFrom(ProtGenerics,precScanNum)
importMethodsFrom(ProtGenerics,rtime)
importMethodsFrom(ProtGenerics,setBackend)
importMethodsFrom(ProtGenerics,smoothed)
importMethodsFrom(ProtGenerics,spectraData)
importMethodsFrom(ProtGenerics,spectraNames)
importMethodsFrom(ProtGenerics,spectraVariables)
importMethodsFrom(ProtGenerics,tic)
importMethodsFrom(ProtGenerics,uniqueMsLevels)
importMethodsFrom(S4Vectors,extractCOLS)
importMethodsFrom(Spectra,backendBpparam)
importMethodsFrom(Spectra,reset)
importMethodsFrom(Spectra,show)
importMethodsFrom(Spectra,supportsSetBackend)
useDynLib(MsBackendParquet, .registration = TRUE)
