Changes in version 0.99.3 Bug fixes - Fixed oneGeneOnePeak handling of gaps between fragments - Fixed the handling of name extraction for the files loaded in loadGrl() Minor improvements - Added the option of also creating sample specific interaction bed files via makeBedGraphs - Changed matrix normalization to a reference sample in getMatrix to normalize to reference sample summit - changed plotSigIntsStats to plotStats to simplify naming Changes in version 0.99.2 - Initial version submitted to Bioconductor