MeasurementError.cor

This is the development version of MeasurementError.cor; for the stable release version, see MeasurementError.cor.

Measurement Error model estimate for correlation coefficient

Bioconductor version: Development (3.24)

Two-stage measurement error model for correlation estimation with smaller bias than the usual sample correlation

Author: Beiying Ding

Maintainer: Beiying Ding <bding at amgen.com>

Citation (from within R, enter citation("MeasurementError.cor")):

Seminal Bioconductor project articles:

Huber W, Carey VJ, Gentleman R, Anders S, Carlson M, Carvalho BS, Bravo HC, Davis S, Gatto L, Girke T, Gottardo R, Hahne F, Hansen KD, Irizarry RA, Lawrence M, Love MI, MacDonald J, Obenchain V, Oleś AK, Pagès H, Reyes A, Shannon P, Smyth GK, Tenenbaum D, Waldron L, Morgan M (2015). "Orchestrating high-throughput genomic analysis with Bioconductor." Nature Methods, 12(2), 115–121. doi:10.1038/nmeth.3252.

Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge Y, Gentry J, Hornik K, Hothorn T, Huber W, Iacus S, Irizarry R, Leisch F, Li C, Maechler M, Rossini AJ, Sawitzki G, Smith C, Smyth G, Tierney L, Yang JYH, Zhang J (2004). "Bioconductor: open software development for computational biology and bioinformatics." Genome Biology, 5(10), R80. doi:10.1186/gb-2004-5-10-r80.

Installation

To install this package, start R (version "4.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("MeasurementError.cor")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MeasurementError.cor")

MeasurementError.cor Tutorial	PDF	R Script
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	Software, StatisticalMethod
Version	1.85.0
In Bioconductor since	BioC 1.6 (R-2.1) or earlier (> 21 years)
License	LGPL
Depends
Imports
System Requirements
URL

Suggests
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Depends On Me
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Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	MeasurementError.cor_1.85.0.tar.gz
Windows Binary (x86_64)	MeasurementError.cor_1.85.0.zip
macOS Binary (big-sur-x86_64)	MeasurementError.cor_1.85.0.tgz
macOS Binary (sonoma-arm64)	MeasurementError.cor_1.85.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/MeasurementError.cor
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/MeasurementError.cor
Bioc Package Browser	https://code.bioconductor.org/browse/MeasurementError.cor/
Package Short Url	https://bioconductor.org/packages/MeasurementError.cor/
Package Downloads Report	Download Stats