Package: CBNplot
Type: Package
Title: plot bayesian network inferred from gene expression data based
        on enrichment analysis results
Version: 1.11.0
Authors@R: person("Noriaki", "Sato", email = "nori@hgc.jp", role = c("cre", "aut"))
Description: This package provides the visualization of bayesian
        network inferred from gene expression data. The networks are
        based on enrichment analysis results inferred from packages
        including clusterProfiler and ReactomePA. The networks between
        pathways and genes inside the pathways can be inferred and
        visualized.
License: Artistic-2.0
Encoding: UTF-8
Depends: R (>= 4.3.0)
Imports: ggplot2, magrittr, graphite, ggraph, igraph, bnlearn (>= 4.7),
        patchwork, org.Hs.eg.db, clusterProfiler, utils, enrichplot,
        reshape2, ggforce, dplyr, tidyr, stringr, depmap,
        ExperimentHub, Rmpfr, graphlayouts, BiocFileCache, ggdist,
        purrr, pvclust, stats, rlang
Suggests: knitr, arules, concaveman, ReactomePA, bnviewer, rmarkdown,
        withr, BiocStyle, testthat (>= 3.0.0)
biocViews: Visualization, Bayesian, GeneExpression, NetworkInference,
        Pathways, Reactome, Network, NetworkEnrichment,
        GeneSetEnrichment
VignetteBuilder: knitr
RoxygenNote: 7.3.2
URL: https://github.com/noriakis/CBNplot
BugReports: https://github.com/noriakis/CBNplot/issues
Config/testthat/edition: 3
Config/pak/sysreqs: libcairo2-dev libfontconfig1-dev libfreetype6-dev
        libglpk-dev libgmp3-dev make libicu-dev libpng-dev libxml2-dev
        libmpfr-dev libssl-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2025-10-29 15:22:40 UTC
RemoteUrl: https://github.com/bioc/CBNplot
RemoteRef: HEAD
RemoteSha: a7bbf5476517289129bf3baaa29215096a1b5ae0
NeedsCompilation: no
Packaged: 2025-11-02 14:46:30 UTC; root
Author: Noriaki Sato [cre, aut]
Maintainer: Noriaki Sato <nori@hgc.jp>
Built: R 4.6.0; ; 2025-11-02 14:50:27 UTC; windows
