# Generated by roxygen2: do not edit by hand

S3method(modifyData,data_source)
S3method(modifyData,default)
S3method(modifyData,drug_name2)
export(.calculate_complement)
export(.clean_key_inputs)
export(.set_invalid_fit_params)
export(.set_mean_params)
export(.setup_metric_output)
export(.standardize_conc)
export(MAEpply)
export(addClass)
export(aggregate_assay)
export(apply_bumpy_function)
export(assert_choices)
export(average_biological_replicates_dt)
export(calc_sd)
export(capVals)
export(cap_assay_infinities)
export(cap_xc50)
export(convert_colData_to_json)
export(convert_combo_data_to_dt)
export(convert_combo_field_to_assay)
export(convert_mae_assay_to_dt)
export(convert_mae_to_json)
export(convert_metadata_to_json)
export(convert_rowData_to_json)
export(convert_se_assay_to_custom_dt)
export(convert_se_assay_to_dt)
export(convert_se_to_json)
export(define_matrix_grid_positions)
export(demote_fields)
export(df_to_bm_assay)
export(extend_normalization_type_name)
export(fit_curves)
export(flatten)
export(gen_synthetic_data)
export(geometric_mean)
export(get_MAE_identifiers)
export(get_SE_experiment_metadata)
export(get_SE_experiment_raw_data)
export(get_SE_fit_parameters)
export(get_SE_identifiers)
export(get_SE_keys)
export(get_SE_processing_metadata)
export(get_additional_variables)
export(get_assay_dt_duplicated_rows)
export(get_assay_names)
export(get_assay_req_uniq_cols)
export(get_combo_assay_names)
export(get_combo_base_assay_names)
export(get_combo_excess_field_names)
export(get_combo_score_assay_names)
export(get_combo_score_field_names)
export(get_default_identifiers)
export(get_duplicated_rows)
export(get_env_assay_names)
export(get_env_identifiers)
export(get_env_var)
export(get_expect_one_identifiers)
export(get_experiment_groups)
export(get_gDR_session_info)
export(get_header)
export(get_identifiers_dt)
export(get_idfs_synonyms)
export(get_isobologram_columns)
export(get_non_empty_assays)
export(get_prettified_identifiers)
export(get_required_identifiers)
export(get_settings_from_json)
export(get_supported_experiments)
export(get_synthetic_data)
export(get_testdata)
export(get_testdata_codilution)
export(get_testdata_combo)
export(has_assay_dt_duplicated_rows)
export(has_dt_duplicated_rows)
export(has_single_codrug_data)
export(has_valid_codrug_data)
export(identify_unique_se_metadata_fields)
export(is_any_exp_empty)
export(is_combo_data)
export(is_exp_empty)
export(is_mae_empty)
export(logisticFit)
export(loop)
export(map_conc_to_standardized_conc)
export(mcolData)
export(merge_MAE)
export(merge_SE)
export(merge_assay)
export(merge_metadata)
export(modifyData)
export(mrowData)
export(predict_conc_from_efficacy)
export(predict_efficacy_from_conc)
export(predict_smooth_from_combo)
export(prettify_flat_metrics)
export(process_batch)
export(promote_fields)
export(refine_coldata)
export(refine_rowdata)
export(remove_codrug_data)
export(remove_drug_batch)
export(rename_DFrame)
export(rename_bumpy)
export(reset_env_identifiers)
export(round_concentration)
export(set_SE_experiment_metadata)
export(set_SE_experiment_raw_data)
export(set_SE_fit_parameters)
export(set_SE_identifiers)
export(set_SE_keys)
export(set_SE_processing_metadata)
export(set_constant_fit_params)
export(set_env_identifier)
export(set_unique_cl_names)
export(set_unique_cl_names_dt)
export(set_unique_drug_names)
export(set_unique_drug_names_dt)
export(set_unique_identifiers)
export(set_unique_names_dt)
export(shorten_normalization_type_name)
export(split_SE_components)
export(split_big_table_for_xlsx)
export(standardize_mae)
export(standardize_se)
export(throw_msg_if_duplicates)
export(update_drug_name)
export(update_env_idfs_from_mae)
export(update_idfs_synonyms)
export(validate_MAE)
export(validate_SE)
export(validate_identifiers)
export(validate_json)
export(validate_mae_with_schema)
export(validate_se_assay_name)
import(SummarizedExperiment)
importFrom(checkmate,assert_number)
importFrom(data.table,":=")
importFrom(data.table,.N)
importFrom(data.table,.SD)
importFrom(methods,is)
