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#include <itkAdvancedMeanSquaresImageToImageMetric.h>
Public Types | |
typedef SmartPointer< const Self > | ConstPointer |
typedef Superclass::CoordinateRepresentationType | CoordinateRepresentationType |
typedef Superclass::DerivativeType | DerivativeType |
typedef Superclass::FixedImageConstPointer | FixedImageConstPointer |
typedef Superclass::FixedImageLimiterOutputType | FixedImageLimiterOutputType |
typedef Superclass::FixedImageLimiterType | FixedImageLimiterType |
typedef Superclass::FixedImageMaskPointer | FixedImageMaskPointer |
typedef Superclass::FixedImageMaskType | FixedImageMaskType |
typedef Superclass::FixedImagePixelType | FixedImagePixelType |
typedef Superclass::FixedImageRegionType | FixedImageRegionType |
typedef Superclass::FixedImageType | FixedImageType |
typedef Superclass::GradientImageFilterPointer | GradientImageFilterPointer |
typedef Superclass::GradientImageFilterType | GradientImageFilterType |
typedef Superclass::GradientImagePointer | GradientImagePointer |
typedef Superclass::GradientImageType | GradientImageType |
typedef Superclass::GradientPixelType | GradientPixelType |
typedef Superclass::HessianType | HessianType |
typedef Superclass::HessianValueType | HessianValueType |
typedef Superclass::ImageSampleContainerPointer | ImageSampleContainerPointer |
typedef Superclass::ImageSampleContainerType | ImageSampleContainerType |
typedef Superclass::ImageSamplerPointer | ImageSamplerPointer |
typedef Superclass::ImageSamplerType | ImageSamplerType |
typedef Superclass::InputPointType | InputPointType |
typedef Superclass::InterpolatorPointer | InterpolatorPointer |
typedef Superclass::InterpolatorType | InterpolatorType |
typedef Superclass::MeasureType | MeasureType |
typedef Superclass::MovingImageConstPointer | MovingImageConstPointer |
typedef Superclass::MovingImageDerivativeScalesType | MovingImageDerivativeScalesType |
typedef Superclass::MovingImageLimiterOutputType | MovingImageLimiterOutputType |
typedef Superclass::MovingImageLimiterType | MovingImageLimiterType |
typedef Superclass::MovingImageMaskPointer | MovingImageMaskPointer |
typedef Superclass::MovingImageMaskType | MovingImageMaskType |
typedef Superclass::MovingImagePixelType | MovingImagePixelType |
typedef Superclass::MovingImageRegionType | MovingImageRegionType |
typedef Superclass::MovingImageType | MovingImageType |
typedef Superclass::OutputPointType | OutputPointType |
typedef Superclass::ParametersType | ParametersType |
typedef SmartPointer< Self > | Pointer |
typedef Superclass::RealType | RealType |
typedef AdvancedMeanSquaresImageToImageMetric | Self |
typedef AdvancedImageToImageMetric < TFixedImage, TMovingImage > | Superclass |
typedef Superclass::TransformJacobianType | TransformJacobianType |
typedef Superclass::TransformParametersType | TransformParametersType |
typedef Superclass::TransformPointer | TransformPointer |
typedef Superclass::TransformType | TransformType |
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typedef AdvancedTransform < ScalarType, FixedImageDimension, MovingImageDimension > | AdvancedTransformType |
typedef SmartPointer< const Self > | ConstPointer |
typedef Superclass::CoordinateRepresentationType | CoordinateRepresentationType |
typedef Superclass::DerivativeType | DerivativeType |
typedef DerivativeType::ValueType | DerivativeValueType |
typedef Superclass::FixedImageConstPointer | FixedImageConstPointer |
typedef FixedImageLimiterType::OutputType | FixedImageLimiterOutputType |
typedef LimiterFunctionBase < RealType, FixedImageDimension > | FixedImageLimiterType |
typedef Superclass::FixedImageMaskPointer | FixedImageMaskPointer |
typedef Superclass::FixedImageMaskType | FixedImageMaskType |
typedef FixedImageType::PixelType | FixedImagePixelType |
typedef FixedImageType::Pointer | FixedImagePointer |
typedef Superclass::FixedImageRegionType | FixedImageRegionType |
typedef Superclass::FixedImageType | FixedImageType |
typedef Superclass::GradientImageFilterPointer | GradientImageFilterPointer |
typedef Superclass::GradientImageFilterType | GradientImageFilterType |
typedef Superclass::GradientImagePointer | GradientImagePointer |
typedef Superclass::GradientImageType | GradientImageType |
typedef Superclass::GradientPixelType | GradientPixelType |
typedef vnl_sparse_matrix < HessianValueType > | HessianType |
typedef DerivativeType::ValueType | HessianValueType |
typedef ImageSamplerType::OutputVectorContainerPointer | ImageSampleContainerPointer |
typedef ImageSamplerType::OutputVectorContainerType | ImageSampleContainerType |
typedef ImageSamplerType::Pointer | ImageSamplerPointer |
typedef ImageSamplerBase < FixedImageType > | ImageSamplerType |
typedef Superclass::InputPointType | InputPointType |
typedef Superclass::InterpolatorPointer | InterpolatorPointer |
typedef Superclass::InterpolatorType | InterpolatorType |
typedef Superclass::MeasureType | MeasureType |
typedef Superclass::MovingImageConstPointer | MovingImageConstPointer |
typedef FixedArray< double, itkGetStaticConstMacro(MovingImageDimension) > | MovingImageDerivativeScalesType |
typedef MovingImageLimiterType::OutputType | MovingImageLimiterOutputType |
typedef LimiterFunctionBase < RealType, MovingImageDimension > | MovingImageLimiterType |
typedef Superclass::MovingImageMaskPointer | MovingImageMaskPointer |
typedef Superclass::MovingImageMaskType | MovingImageMaskType |
typedef Superclass::MovingImagePixelType | MovingImagePixelType |
typedef MovingImageType::Pointer | MovingImagePointer |
typedef MovingImageType::RegionType | MovingImageRegionType |
typedef Superclass::MovingImageType | MovingImageType |
typedef Superclass::OutputPointType | OutputPointType |
typedef Superclass::ParametersType | ParametersType |
typedef SmartPointer< Self > | Pointer |
typedef Superclass::RealType | RealType |
typedef TransformType::ScalarType | ScalarType |
typedef AdvancedImageToImageMetric | Self |
typedef ImageToImageMetric < TFixedImage, TMovingImage > | Superclass |
typedef Superclass::TransformJacobianType | TransformJacobianType |
typedef Superclass::TransformParametersType | TransformParametersType |
typedef Superclass::TransformPointer | TransformPointer |
typedef Superclass::TransformType | TransformType |
Static Public Member Functions | |
static Pointer | New () |
Private Member Functions | |
AdvancedMeanSquaresImageToImageMetric (const Self &) | |
void | operator= (const Self &) |
Private Attributes | |
unsigned int | m_NumberOfSamplesForSelfHessian |
double | m_SelfHessianNoiseRange |
double | m_SelfHessianSmoothingSigma |
bool | m_UseNormalization |
Compute Mean square difference between two images, based on AdvancedImageToImageMetric...
This Class is templated over the type of the fixed and moving images to be compared.
This metric computes the sum of squared differenced between pixels in the moving image and pixels in the fixed image. The spatial correspondance between both images is established through a Transform. Pixel values are taken from the Moving image. Their positions are mapped to the Fixed image and result in general in non-grid position on it. Values at these non-grid position of the Fixed image are interpolated using a user-selected Interpolator.
This implementation of the MeanSquareDifference is based on the AdvancedImageToImageMetric, which means that:
Definition at line 54 of file itkAdvancedMeanSquaresImageToImageMetric.h.
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Definition at line 186 of file itkAdvancedMeanSquaresImageToImageMetric.h.
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Definition at line 187 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef SmartPointer<const Self> itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::ConstPointer |
Definition at line 64 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::CoordinateRepresentationType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::CoordinateRepresentationType |
Typedefs from the superclass.
Definition at line 70 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::DerivativeType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::DerivativeType |
Definition at line 100 of file itkAdvancedMeanSquaresImageToImageMetric.h.
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Definition at line 197 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::FixedImageConstPointer itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::FixedImageConstPointer |
Definition at line 79 of file itkAdvancedMeanSquaresImageToImageMetric.h.
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Protected Typedefs Typedefs inherited from superclass
Definition at line 180 of file itkAdvancedMeanSquaresImageToImageMetric.h.
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Definition at line 181 of file itkAdvancedMeanSquaresImageToImageMetric.h.
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Definition at line 195 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::FixedImageLimiterOutputType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::FixedImageLimiterOutputType |
Definition at line 112 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::FixedImageLimiterType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::FixedImageLimiterType |
Definition at line 109 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::FixedImageMaskPointer itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::FixedImageMaskPointer |
Definition at line 96 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::FixedImageMaskType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::FixedImageMaskType |
Definition at line 95 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::FixedImagePixelType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::FixedImagePixelType |
Definition at line 102 of file itkAdvancedMeanSquaresImageToImageMetric.h.
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Definition at line 183 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::FixedImageRegionType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::FixedImageRegionType |
Definition at line 80 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::FixedImageType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::FixedImageType |
Definition at line 78 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::GradientImageFilterPointer itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::GradientImageFilterPointer |
Definition at line 94 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::GradientImageFilterType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::GradientImageFilterType |
Definition at line 93 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::GradientImagePointer itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::GradientImagePointer |
Definition at line 92 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::GradientImageType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::GradientImageType |
Definition at line 91 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::GradientPixelType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::GradientPixelType |
Definition at line 90 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::HessianType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::HessianType |
Definition at line 120 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::HessianValueType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::HessianValueType |
Some typedefs for computing the SelfHessian
Definition at line 119 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::ImageSampleContainerPointer itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::ImageSampleContainerPointer |
Definition at line 108 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::ImageSampleContainerType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::ImageSampleContainerType |
Definition at line 106 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::ImageSamplerPointer itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::ImageSamplerPointer |
Definition at line 105 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::ImageSamplerType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::ImageSamplerType |
Definition at line 104 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::InputPointType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::InputPointType |
Definition at line 83 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::InterpolatorPointer itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::InterpolatorPointer |
Definition at line 88 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::InterpolatorType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::InterpolatorType |
Definition at line 87 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::MeasureType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::MeasureType |
Definition at line 99 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::MovingImageConstPointer itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::MovingImageConstPointer |
Definition at line 77 of file itkAdvancedMeanSquaresImageToImageMetric.h.
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Definition at line 185 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::MovingImageDerivativeScalesType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::MovingImageDerivativeScalesType |
Definition at line 116 of file itkAdvancedMeanSquaresImageToImageMetric.h.
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Definition at line 188 of file itkAdvancedMeanSquaresImageToImageMetric.h.
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Definition at line 182 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::MovingImageLimiterOutputType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::MovingImageLimiterOutputType |
Definition at line 114 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::MovingImageLimiterType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::MovingImageLimiterType |
Definition at line 110 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::MovingImageMaskPointer itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::MovingImageMaskPointer |
Definition at line 98 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::MovingImageMaskType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::MovingImageMaskType |
Definition at line 97 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::MovingImagePixelType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::MovingImagePixelType |
Definition at line 76 of file itkAdvancedMeanSquaresImageToImageMetric.h.
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Definition at line 184 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::MovingImageRegionType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::MovingImageRegionType |
Definition at line 103 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::MovingImageType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::MovingImageType |
Definition at line 75 of file itkAdvancedMeanSquaresImageToImageMetric.h.
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Definition at line 189 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::OutputPointType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::OutputPointType |
Definition at line 84 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::ParametersType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::ParametersType |
Definition at line 101 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef SmartPointer<Self> itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::Pointer |
Definition at line 63 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::RealType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::RealType |
Definition at line 89 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef AdvancedMeanSquaresImageToImageMetric itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::Self |
Standard class typedefs.
Definition at line 60 of file itkAdvancedMeanSquaresImageToImageMetric.h.
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Definition at line 199 of file itkAdvancedMeanSquaresImageToImageMetric.h.
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Protected typedefs for SelfHessian
Definition at line 193 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef AdvancedImageToImageMetric< TFixedImage, TMovingImage > itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::Superclass |
Definition at line 62 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::TransformJacobianType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::TransformJacobianType |
Definition at line 86 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::TransformParametersType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::TransformParametersType |
Definition at line 85 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::TransformPointer itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::TransformPointer |
Definition at line 82 of file itkAdvancedMeanSquaresImageToImageMetric.h.
typedef Superclass::TransformType itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::TransformType |
Definition at line 81 of file itkAdvancedMeanSquaresImageToImageMetric.h.
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Definition at line 174 of file itkAdvancedMeanSquaresImageToImageMetric.h.
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Computes the innerproduct of transform Jacobian with moving image gradient. The results are stored in imageJacobian, which is supposed to have the right size (same length as Jacobian's number of columns).
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Run-time type information (and related methods).
Reimplemented from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >.
Reimplemented in elastix::AdvancedMeanSquaresMetric< TElastix >.
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Get the derivatives of the match measure.
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Experimental feature: compute SelfHessian
Reimplemented from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >.
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Get the value for single valued optimizers.
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Get value and derivatives for multiple valued optimizers.
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Initialize the Metric by making sure that all the components are present and plugged together correctly.
Reimplemented from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >.
Reimplemented in elastix::AdvancedMeanSquaresMetric< TElastix >.
itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::itkStaticConstMacro | ( | FixedImageDimension | , |
unsigned | int, | ||
FixedImageType::ImageDimension | |||
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The fixed image dimension.
itk::AdvancedMeanSquaresImageToImageMetric< TFixedImage, TMovingImage >::itkStaticConstMacro | ( | MovingImageDimension | , |
unsigned | int, | ||
MovingImageType::ImageDimension | |||
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The moving image dimension.
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Method for creation through the object factory.
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Default: 100000
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Default: 1.0 mm
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Default: 1.0 mm
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Set/Get whether to normalize the mean squares measure. This divides the MeanSquares by a factor (range/10)^2, where range represents the maximum gray value range of the images. Based on the ad hoc assumption that range/10 is the maximum average difference that will be observed. Dividing by range^2 sounds less ad hoc, but will yield very small values.
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Compute a pixel's contribution to the SelfHessian; Called by GetSelfHessian().
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Compute a pixel's contribution to the measure and derivatives; Called by GetValueAndDerivative().
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Definition at line 201 of file itkAdvancedMeanSquaresImageToImageMetric.h.
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Definition at line 235 of file itkAdvancedMeanSquaresImageToImageMetric.h.
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Definition at line 234 of file itkAdvancedMeanSquaresImageToImageMetric.h.
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Definition at line 233 of file itkAdvancedMeanSquaresImageToImageMetric.h.
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Definition at line 232 of file itkAdvancedMeanSquaresImageToImageMetric.h.
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