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elastix::Simplex< TElastix > Class Template Reference

#include <elxSimplex.h>

Inheritance diagram for elastix::Simplex< TElastix >:
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Collaboration diagram for elastix::Simplex< TElastix >:
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Public Types

typedef
Superclass2::ConfigurationPointer 
ConfigurationPointer
 
typedef
Superclass2::ConfigurationType 
ConfigurationType
 
typedef SmartPointer< const SelfConstPointer
 
typedef
Superclass1::CostFunctionPointer 
CostFunctionPointer
 
typedef
Superclass1::CostFunctionType 
CostFunctionType
 
typedef Superclass2::ElastixPointer ElastixPointer
 
typedef Superclass2::ElastixType ElastixType
 
typedef Superclass2::ITKBaseType ITKBaseType
 
typedef Superclass1::ParametersType ParametersType
 
typedef SmartPointer< SelfPointer
 
typedef
Superclass2::RegistrationPointer 
RegistrationPointer
 
typedef
Superclass2::RegistrationType 
RegistrationType
 
typedef Simplex Self
 
typedef AmoebaOptimizer Superclass1
 
typedef OptimizerBase< TElastix > Superclass2
 
- Public Types inherited from elastix::OptimizerBase< TElastix >
typedef
Superclass::ConfigurationPointer 
ConfigurationPointer
 
typedef
Superclass::ConfigurationType 
ConfigurationType
 
typedef Superclass::ElastixPointer ElastixPointer
 
typedef Superclass::ElastixType ElastixType
 
typedef itk::Optimizer ITKBaseType
 
typedef ITKBaseType::ParametersType ParametersType
 
typedef
Superclass::RegistrationPointer 
RegistrationPointer
 
typedef
Superclass::RegistrationType 
RegistrationType
 
typedef OptimizerBase Self
 
typedef BaseComponentSE< TElastix > Superclass
 
- Public Types inherited from elastix::BaseComponentSE< TElastix >
typedef
ElastixType::ConfigurationPointer 
ConfigurationPointer
 
typedef
ElastixType::ConfigurationType 
ConfigurationType
 
typedef ElastixType::Pointer ElastixPointer
 
typedef TElastix ElastixType
 
typedef RegistrationTypeRegistrationPointer
 
typedef
ElastixType::RegistrationBaseType 
RegistrationType
 
typedef BaseComponentSE Self
 
typedef BaseComponent Superclass
 

Public Member Functions

virtual void AfterEachIteration (void)
 
virtual void AfterEachResolution (void)
 
virtual void AfterRegistration (void)
 
virtual void BeforeEachResolution (void)
 
virtual void BeforeRegistration (void)
 
 elxClassNameMacro ("Simplex")
 
virtual const char * GetClassName () const
 
virtual void SetInitialPosition (const ParametersType &param)
 
- Public Member Functions inherited from elastix::OptimizerBase< TElastix >
virtual void BeforeEachResolutionBase ()
 
virtual ITKBaseTypeGetAsITKBaseType (void)
 
virtual const ITKBaseTypeGetAsITKBaseType (void) const
 
virtual void SetCurrentPositionPublic (const ParametersType &param)
 
virtual void SetSinusScales (double amplitude, double frequency, unsigned long numberOfParameters)
 
- Public Member Functions inherited from elastix::BaseComponentSE< TElastix >
virtual ConfigurationTypeGetConfiguration (void) const
 
virtual ElastixTypeGetElastix (void) const
 
virtual RegistrationPointer GetRegistration (void) const
 
virtual void SetConfiguration (ConfigurationType *_arg)
 
virtual void SetElastix (ElastixType *_arg)
 
- Public Member Functions inherited from elastix::BaseComponent
virtual void AfterEachIterationBase (void)
 
virtual void AfterEachResolutionBase (void)
 
virtual void AfterRegistrationBase (void)
 
virtual int BeforeAll (void)
 
virtual int BeforeAllBase (void)
 
virtual void BeforeRegistrationBase (void)
 
virtual const char * elxGetClassName (void) const
 
virtual const char * GetComponentLabel (void) const
 
virtual void SetComponentLabel (const char *label, unsigned int idx)
 

Static Public Member Functions

static Pointer New ()
 

Protected Member Functions

 Simplex ()
 
virtual ~Simplex ()
 
- Protected Member Functions inherited from elastix::OptimizerBase< TElastix >
virtual bool GetNewSamplesEveryIteration (void) const
 
 OptimizerBase ()
 
virtual void SelectNewSamples (void)
 
virtual ~OptimizerBase ()
 
- Protected Member Functions inherited from elastix::BaseComponentSE< TElastix >
 BaseComponentSE ()
 
virtual ~BaseComponentSE ()
 
- Protected Member Functions inherited from elastix::BaseComponent
 BaseComponent ()
 
virtual ~BaseComponent ()
 

Private Member Functions

void operator= (const Self &)
 
 Simplex (const Self &)
 

Additional Inherited Members

- Protected Attributes inherited from elastix::BaseComponentSE< TElastix >
ConfigurationPointer m_Configuration
 
ElastixPointer m_Elastix
 
RegistrationPointer m_Registration
 

Detailed Description

template<class TElastix>
class elastix::Simplex< TElastix >

An optimizer based on Simplex...

This optimizer is a wrap around the itk::AmoebaOptimizer. This wrap-around class takes care of setting parameters, and printing progress information. For detailed information about the optimisation method, please read the documentation of the itkAmoebaOptimizer (in the ITK-manual).

See Also
ImprovedSimplexOptimizer

Definition at line 39 of file elxSimplex.h.

Member Typedef Documentation

template<class TElastix >
typedef Superclass2::ConfigurationPointer elastix::Simplex< TElastix >::ConfigurationPointer

Definition at line 74 of file elxSimplex.h.

template<class TElastix >
typedef Superclass2::ConfigurationType elastix::Simplex< TElastix >::ConfigurationType

Definition at line 73 of file elxSimplex.h.

template<class TElastix >
typedef SmartPointer<const Self> elastix::Simplex< TElastix >::ConstPointer

Definition at line 52 of file elxSimplex.h.

template<class TElastix >
typedef Superclass1::CostFunctionPointer elastix::Simplex< TElastix >::CostFunctionPointer

Definition at line 68 of file elxSimplex.h.

template<class TElastix >
typedef Superclass1::CostFunctionType elastix::Simplex< TElastix >::CostFunctionType

Typedef's inherited from Superclass1.

Definition at line 67 of file elxSimplex.h.

template<class TElastix >
typedef Superclass2::ElastixPointer elastix::Simplex< TElastix >::ElastixPointer

Definition at line 72 of file elxSimplex.h.

template<class TElastix >
typedef Superclass2::ElastixType elastix::Simplex< TElastix >::ElastixType

Typedef's inherited from Elastix.

Definition at line 71 of file elxSimplex.h.

template<class TElastix >
typedef Superclass2::ITKBaseType elastix::Simplex< TElastix >::ITKBaseType

Definition at line 77 of file elxSimplex.h.

template<class TElastix >
typedef Superclass1::ParametersType elastix::Simplex< TElastix >::ParametersType

Typedef for the ParametersType.

Definition at line 80 of file elxSimplex.h.

template<class TElastix >
typedef SmartPointer<Self> elastix::Simplex< TElastix >::Pointer

Definition at line 51 of file elxSimplex.h.

template<class TElastix >
typedef Superclass2::RegistrationPointer elastix::Simplex< TElastix >::RegistrationPointer

Definition at line 76 of file elxSimplex.h.

template<class TElastix >
typedef Superclass2::RegistrationType elastix::Simplex< TElastix >::RegistrationType

Definition at line 75 of file elxSimplex.h.

template<class TElastix >
typedef Simplex elastix::Simplex< TElastix >::Self

Standard ITK.

Definition at line 48 of file elxSimplex.h.

template<class TElastix >
typedef AmoebaOptimizer elastix::Simplex< TElastix >::Superclass1

Definition at line 49 of file elxSimplex.h.

template<class TElastix >
typedef OptimizerBase<TElastix> elastix::Simplex< TElastix >::Superclass2

Definition at line 50 of file elxSimplex.h.

Constructor & Destructor Documentation

template<class TElastix >
elastix::Simplex< TElastix >::Simplex ( )
inlineprotected

Definition at line 98 of file elxSimplex.h.

template<class TElastix >
virtual elastix::Simplex< TElastix >::~Simplex ( )
inlineprotectedvirtual

Definition at line 99 of file elxSimplex.h.

template<class TElastix >
elastix::Simplex< TElastix >::Simplex ( const Self )
private

Member Function Documentation

template<class TElastix >
virtual void elastix::Simplex< TElastix >::AfterEachIteration ( void  )
virtual

Reimplemented from elastix::BaseComponent.

template<class TElastix >
virtual void elastix::Simplex< TElastix >::AfterEachResolution ( void  )
virtual

Reimplemented from elastix::BaseComponent.

template<class TElastix >
virtual void elastix::Simplex< TElastix >::AfterRegistration ( void  )
virtual

Reimplemented from elastix::BaseComponent.

template<class TElastix >
virtual void elastix::Simplex< TElastix >::BeforeEachResolution ( void  )
virtual

Reimplemented from elastix::BaseComponent.

template<class TElastix >
virtual void elastix::Simplex< TElastix >::BeforeRegistration ( void  )
virtual

Methods invoked by elastix, in which parameters can be set and progress information can be printed.

Reimplemented from elastix::BaseComponent.

template<class TElastix >
elastix::Simplex< TElastix >::elxClassNameMacro ( "Simplex< TElastix >"  )

Name of this class. Use this name in the parameter file to select this specific optimizer.
example: (Optimizer "Simplex")

template<class TElastix >
virtual const char* elastix::Simplex< TElastix >::GetClassName ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from elastix::OptimizerBase< TElastix >.

template<class TElastix >
static Pointer elastix::Simplex< TElastix >::New ( )
static

Method for creation through the object factory.

template<class TElastix >
void elastix::Simplex< TElastix >::operator= ( const Self )
private
template<class TElastix >
virtual void elastix::Simplex< TElastix >::SetInitialPosition ( const ParametersType param)
virtual

Override the SetInitialPosition. Override the implementation in itkOptimizer.h, to ensure that the scales array and the parameters array have the same size.



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